Gene SeD_A2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2389 
Symbol 
ID6874730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2259159 
End bp2260514 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content62% 
IMG OID642785480 
Productpolyhedral body protein 
Protein accessionYP_002216138 
Protein GI198245042 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCATCAATAG CGTTGAAATG TCCCATAGCG CCGATGAAAT TCGCGAGCGC 
GTCCGCGCAG CGGGCGTTGT CGGCGCGGGC GGCGCAGGTT TTCCCGCTCA CGTCAAACTA
CAGGCGCAGG TAGAGATTTT TCTGGTGAAC GCCGCCGAAT GTGAACCGAT GCTCAAAGTT
GACCAGCAAC TGATGTGGCA GCAGGCCGCG CGTCTTGTTC GCGGCGTGCA GTACGCGATG
ACGGCAACCG GCGCGCGCGA AGGGGTGATA GCCCTGAAAG AAAAATACCG CCGGGCCATC
GACGCCCTCA CTCCACTGCT GCCAGACGGT ATCCGCCTGC ATATCCTGCC GGATGTATAT
CCCGCGGGCG ATGAGGTGCT GACTATCTGG ATGGCAACCG GTCGTCGGGT CGCCCCGGCT
GCGCTGCCTG CCAGCGTCGG CGTGGTCGTC AATAACGTGC AAACGGTACT CAATATTGCC
CGGGCGGTCG AGCAGCAGTT TCCGGTCACT CGTCGCACGT TGACCGTGAA CGGCGCGGTC
GTCAGACCGT TGACCGTTAC CGTTCCTGTC GGCATGTCAC TGCATGAAGT GCTGGCGCTG
GCGGGCGGCG CAACGGTCGA CGACCCTGGT TTTATTAACG GCGGCCCGAT GATGGGTGGC
CTGATTACCT CTCTTGATAA CCCGGTGACG AAAACTACCG GCGGCCTGCT GGTGCTCCCA
AAAAGCCATC CGCTTATCCA GCGGAGAATG CAGGACGAGC GCACGGTGCT TTCCGTCGCG
CGCACAGTCT GCGAACAGTG CCGACTGTGT ACCGATCTCT GCCCGCGACA CCTGATCGGC
CACGAACTCT CTCCGCACTT GCTGGTGCGG GCGGTGAACT TTCACCAGGC TGCCACGCCA
CAGCTGCTGC TGAGCGCCCT TACCTGCTCG GAATGCAACG TTTGCGAAAG CGTGGCCTGT
CCGGTGGGGA TCTCGCCGAT GCGCATCAAC CGCATGTTAA AACGCGAGCT GCGGGCGCAA
AACCAGCGCT ACAAAGGGCC GCTGAATCCG TCCGACGAAA TGGCGAAATA TCGCCTGGTG
CCGGTGAAGC GGCTGATCGC CAAACTGGGA CTAAGCCCCT GGTACCAGGA AGCGCCGCTG
GTTGAAGACG AACCGGCTGT AGGAACAGTG ACTTTGCAAC TGCGCCAGCA TATTGGTGCC
AGCGCGGTAG CGAACGTTGC GGTGGGAGAA CGCGTGACGC GCGGGCAATG CGTTGCTGAT
GTCCCGCCTG GCGCGCTCGG CGCACCCATT CACGCCAGCA TCGACGGCGT TGTATCGGCC
ATCAGCGAAC AGGCCATCAC GGTTGTAAGA GGTTAA
 
Protein sequence
MSAAINSVEM SHSADEIRER VRAAGVVGAG GAGFPAHVKL QAQVEIFLVN AAECEPMLKV 
DQQLMWQQAA RLVRGVQYAM TATGAREGVI ALKEKYRRAI DALTPLLPDG IRLHILPDVY
PAGDEVLTIW MATGRRVAPA ALPASVGVVV NNVQTVLNIA RAVEQQFPVT RRTLTVNGAV
VRPLTVTVPV GMSLHEVLAL AGGATVDDPG FINGGPMMGG LITSLDNPVT KTTGGLLVLP
KSHPLIQRRM QDERTVLSVA RTVCEQCRLC TDLCPRHLIG HELSPHLLVR AVNFHQAATP
QLLLSALTCS ECNVCESVAC PVGISPMRIN RMLKRELRAQ NQRYKGPLNP SDEMAKYRLV
PVKRLIAKLG LSPWYQEAPL VEDEPAVGTV TLQLRQHIGA SAVANVAVGE RVTRGQCVAD
VPPGALGAPI HASIDGVVSA ISEQAITVVR G