Gene SeD_A2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2273 
Symbol 
ID6871683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2167978 
End bp2168328 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content59% 
IMG OID642785371 
ProductHNH endonuclease 
Protein accessionYP_002216033 
Protein GI198241798 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0446972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000000000000086508 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTCCAC GAACCCCAAA AGCCTGTCGC GTTCGCGGCT GCCGCCATAC CACGACTGAC 
CCGTCAGGCT ATTGCGAAAG CCACAAAAGC GAAGGCTGGA AGCAATACAA GCCAGGCCAG 
TCCCGATACC AGCGCGGTTA TGGTTCGAAG TGGGACGTTA TCCGCGCGCG TGTGCTGAAG 
CGTGACAAAG GCCTGTGCCA GTTGTGCCTG CGTGCCGGTG TGGTGCGTGA GGCGAAAACC 
GTTGACCACA TCATCCCTAA AGCGCATGGC GGCACTGATG CCGACAGTAA TCTGCAGAGT 
CTGTGCTGGC CCTGCCATAA GGCGAAGACG GCCCGTGAAC GGTTAAAGTG A
 
Protein sequence
MPPRTPKACR VRGCRHTTTD PSGYCESHKS EGWKQYKPGQ SRYQRGYGSK WDVIRARVLK 
RDKGLCQLCL RAGVVREAKT VDHIIPKAHG GTDADSNLQS LCWPCHKAKT ARERLK