Gene SeD_A2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2252 
Symbol 
ID6875723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2152600 
End bp2153013 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content55% 
IMG OID642785353 
Productphage protein GP46 
Protein accessionYP_002216015 
Protein GI198241878 
COG category[S] Function unknown 
COG ID[COG4381] Mu-like prophage protein gp46 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00086337 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCTTT ATGTTAATGG AATCCGTAAG GATGCCACGG CTTCGCTCGA CTTTCTGACG 
CGGGCAGTGG TGATTTCTCT TTTTACCTGG CGCCGGGCGG AGCGGGATGA CAGGACCCCA 
CAGCCATACG GCTGGTGGGG GGACACCTGG CCTGCTGTTC AGAATGACCG CATCGGTTCC 
CGCCTCTACC TGCTGAAACG CCGCAAACTC ACCAATAAAA CGCCGCAGGA TGCCCGCGAA 
TACATGCAGC AGGCGCTGGC GTGGATGACA GACGATGGCG TGGCGGCACG TATTGATGTG 
ACATCTGAAC GCACAGGAAC AGATACCCTG GCAGCTGGCG TGACGATATA TCAGCGGGAC 
GGGGTAATTC ACAATATTAC ATTCGATGAT ATATGGAGCA AACTTAATGG CTGA
 
Protein sequence
MILYVNGIRK DATASLDFLT RAVVISLFTW RRAERDDRTP QPYGWWGDTW PAVQNDRIGS 
RLYLLKRRKL TNKTPQDARE YMQQALAWMT DDGVAARIDV TSERTGTDTL AAGVTIYQRD 
GVIHNITFDD IWSKLNG