Gene SeD_A2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2235 
Symbol 
ID6875025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2139011 
End bp2139523 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content52% 
IMG OID642785337 
Productinner membrane protein YcdZ 
Protein accessionYP_002216000 
Protein GI198245202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.800715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT TTTCTGTTAT GATGCGCGCC ATGAACATAC TTCTTTCTAT TGCTATCACG 
ACGGGCATCC TTTCTGGAAT ATGGGGATGG GTGGCCGTCT CCCTGGGGTT ACTAAGCTGG 
GCCGGTTTTT TAGGTTGTAC GGCTTATTTC GCCTGTCCGC AGGGCGGCTT TAAGGGATTG 
TTAATTTCCG TCTGTACGCT GTTAAGCGGT ATGGTGTGGG CGCTGGTCAT TATTCACGGT 
AGCGCGTTGG CGCCGCATCT GGAAATTGTC AGTTACGTGT TGACGGGGAT CGTGGCATTC 
CTGATGTGTA TCCAGGCAAA GCAGCTATTG CTTTCTTTTG TTCCGGGAAC ATTTATCGGC 
GCCTGCGCGA CATTTGCAGG GCAGGGTGAC TGGCGGTTGG TATTACCGTC GCTGGCGCTG 
GGGCTAATCT TTGGCTATGC CATGAAAAAT AGTGGGCTAT GGCTGGCATC ACGCCGCGAG 
CAACATTCAG CGAATACGGC GGTCACAAAA TAA
 
Protein sequence
MRRFSVMMRA MNILLSIAIT TGILSGIWGW VAVSLGLLSW AGFLGCTAYF ACPQGGFKGL 
LISVCTLLSG MVWALVIIHG SALAPHLEIV SYVLTGIVAF LMCIQAKQLL LSFVPGTFIG 
ACATFAGQGD WRLVLPSLAL GLIFGYAMKN SGLWLASRRE QHSANTAVTK