Gene SeD_A2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2117 
Symbol 
ID6875308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2032604 
End bp2032948 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content42% 
IMG OID642785225 
Productlysozyme inhibitor 
Protein accessionYP_002215890 
Protein GI198246097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00169453 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGAAAC GTAAATTGAT CCCATTTACC CTCTTTCTCG CTGCGCTTAG CGCCAGTACC 
ACCTCTATAG CAGCTTCGCA GGAGATTTCT AAATCTATAT ACACCTGTAA TGATAACCAG 
GTTATGGAGG TGATTTACGT CAACACCGAG GCTGGAAACG CCTATGCGAT TATCAGTCAG 
GTAAACGAGA TGATCCCGAT GCGGTTAATG AAAATGGCCT CCGGAGCAAA TTACGAAGCC 
ATAGACAAAA ATTATACTTA TAAACTTTAT ACCAAAGGCA AAACGGCTGA ACTGGTGGAA 
GGTGATGATA AACCTGTTCT CAGTAACTGT TCCTTAGCTA ACTAA
 
Protein sequence
MMKRKLIPFT LFLAALSAST TSIAASQEIS KSIYTCNDNQ VMEVIYVNTE AGNAYAIISQ 
VNEMIPMRLM KMASGANYEA IDKNYTYKLY TKGKTAELVE GDDKPVLSNC SLAN