Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2105 |
Symbol | |
ID | 6871385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2025260 |
End bp | 2026234 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642785215 |
Product | dipeptide/oligopeptide/nickel ABC transporter, permease |
Protein accession | YP_002215880 |
Protein GI | 198243074 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.000398948 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTGT TCTTCAGTCA TTTTTTGCGG CTGATTATTC TGTTGGTGCT GGTGGCTGCC GGCACCTTCA TTTTGCTTAG CTTTTCGCCC GTTGATCCTA TCCGTGCTTA TATTGGCAAC GATCTGCTCC ATGTTCCGCC AGAACAATAT GCGCGGATTG CGGCGCGCTG GGGGCTCGAC CAGCCGCTGT GGGAGCGTTT CGGTCACTGG TTTTGGCGTC TGCTCCAGGG TGACATGGGG TATTCCATGC TGTTCAACAT GCCTGTCGCC AGCGTGATCC GGGAACGTTT TGCGACGTCA TTCGCGCTGC TGGCGGGCGC CTGGCTATTG TCTGGTGTGC TGGGCGTGAC ATTGGGTTTT CTGGCCGGAC GTTTTCTCCA CCGTTGGCCG GATAAGATGA TTTGCCGTAT CAGCTACTTA TTGTCATCGT TGCCCACTTT CTGGATAGCA ATGCTGTTGC TGGCGCTATT TGCCGTCCGC TGGCCGGTAT TACCTGTTTG TTGCGCCTGG GACCCCGGAA ATAATGCAGG AACAGCTCTT TTATCGGAAC GTTTACGCCA TCTTGTGTTG CCGGTATGTG CGTTAAGTCT ATTGGGCATG GGGCAAATTG CGCTGCATAC GCGAGAAAAA ATAGCCAGCG TAATGAAGAG CGAATTTATT CGTTTTGCGC GCGCTCAGGG GGATAAAGGA TGGTCGCTGT TACGTCACCA GGTGTTACGT CATGCGATTA CCCCAGCACT CTGTTTACAG TTTGCTTCTC TGGGCGAACT GATGGGGGGA GCGTTACTGG CAGAAAAAGT CTTTGCGTAT CCGGGGCTGG GACAGGCCAC TATCGATGCC GGCCTGCGTG GCGATGTCCC GCTACTCATG GGGATCGTTT TATTCTGTAC ACTATTAGTG TTTGCCGGAA ATACGATTTC AGCCTGGCTT GTGGTGGTGC TTAATCGATC GCTGGAGCGT CCCGATGCTC TATAA
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Protein sequence | MKLFFSHFLR LIILLVLVAA GTFILLSFSP VDPIRAYIGN DLLHVPPEQY ARIAARWGLD QPLWERFGHW FWRLLQGDMG YSMLFNMPVA SVIRERFATS FALLAGAWLL SGVLGVTLGF LAGRFLHRWP DKMICRISYL LSSLPTFWIA MLLLALFAVR WPVLPVCCAW DPGNNAGTAL LSERLRHLVL PVCALSLLGM GQIALHTREK IASVMKSEFI RFARAQGDKG WSLLRHQVLR HAITPALCLQ FASLGELMGG ALLAEKVFAY PGLGQATIDA GLRGDVPLLM GIVLFCTLLV FAGNTISAWL VVVLNRSLER PDAL
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