Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2104 |
Symbol | |
ID | 6871001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2024458 |
End bp | 2025270 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642785214 |
Product | Adipeptide/di-oligopeptide/nickel ABC transporter permease subunit |
Protein accession | YP_002215879 |
Protein GI | 198242152 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.000641453 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCTATA ATCCTGCCCC GACGTTGTTT CGTCTGATCC TCTCCGTTAC CTGTCTGCTG TTTATTGCCG GATACGGTTA TGCCACGTTG AGCCAGCCGC CAGAGGTTAA TCTGCTTGCC CGGCATCTGT CGCCTGATAT CCAGCACTGG TTTGGCACCG ATAATCTGGG GCGCGATGTA TGGCTTCGTT GCTTTCAGGG GGCCTTCACC AGTTTACAAA TTGGCGTTGG CGCCGCGCTG TGCAGCGGCG TTATCGCGCT AGTGATGGCG GCAGTGGTGC GCATTCATCC CCGGCTGGAC CTCCTGATGC GGTTGATAAC CGATGCTATG CTCGCCATGC CGCATTTACT TTTGCTGATC CTTATCTGTT TTACGCTCGG CGGCGGTAAA AGCGGCGTCA TTGCGGCCGT GGCGTTAACG CACTGGCCCC GTCTGGCGCT GATTCTGCGC GCCGACGCGG AGCGGGTAGC GCAGAGTGAC TACCTGACAT TGACCTATCG TCTGGGGCAT GGACACCTTT ATTGCTGGCG ATATCACTAT TTTCCGGCGC TATTGCCGCA ATGGTTGACG GGAACGTTAT TGATGTTTCC TCATGCGGTA TTGCACAGCG CGGCATTAAG TTTTCTGGGG TTTGGGCTGG CGCCGCATGA GCCTTCGCTG GGGCTGTTGC TGGCGGATGC GTTACGGTTT ATTAGCCATG GTAACTGGTG GCTGGTGCTG TTTCCCGGCC TAATGTTATT CACGCTGGTG ATGCTCTTCG ATCAGTTTGC GCGCGCCATT CAGCGGCTGT GGCTAAGGAG TGACGTATGC TAA
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Protein sequence | MLYNPAPTLF RLILSVTCLL FIAGYGYATL SQPPEVNLLA RHLSPDIQHW FGTDNLGRDV WLRCFQGAFT SLQIGVGAAL CSGVIALVMA AVVRIHPRLD LLMRLITDAM LAMPHLLLLI LICFTLGGGK SGVIAAVALT HWPRLALILR ADAERVAQSD YLTLTYRLGH GHLYCWRYHY FPALLPQWLT GTLLMFPHAV LHSAALSFLG FGLAPHEPSL GLLLADALRF ISHGNWWLVL FPGLMLFTLV MLFDQFARAI QRLWLRSDVC
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