Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2029 |
Symbol | |
ID | 6875573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1962808 |
End bp | 1963650 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642785143 |
Product | DNA-binding transcriptional regulator ChbR |
Protein accession | YP_002215809 |
Protein GI | 198245333 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGC TACAGGTTAA CGCAACGGAA ATCAAAACGG TTTATGAGCA GCAGCTCTTC AATGGCAAAA ATTTCCATGT GTTTATCTAT AACAAGACGG AAAGCGTCAC CGGGCTGCAT CAGCACGACT ACTATGAATT TACCCTGGTA TTAACCGGAC GTTATTACCA GGAGATCAAC GGGAAGCGTG TGCTGCTGGA ACGTGGAGAT TTTGTTTTTA TCCCGGTGGG GTCGAATCAC CAAAGTTTCT ATGAGTTTGG CGCAACGCGT ATTCTGAACG TAGGAATTAG TAAACGTTTT TTTGAACAGC ATTATCTTCC GTTACTGCCG TTTTGTTTTG TGGCATCGCA GGTATACAGG GCGAATAGCA CCTTCCTTAC CTATATTGAA ACGGTGATTG CGTCGTTGAA TTTTCGCGGC AATGGGCTCG ACGAATTTAT CGAAGTGGTG ACATTTTATA TTATAAACCG CTTACGTCAT TACCGCGAAG AGCAGGTTTA TGATGATATT CCACAATGGC TGAAAGCAAC CGTGGAGATA ATGCATGATA AAACGCAGTT TGGCGAACAT GCGCTGGAAA ATATGGTGCG CCTGTCGGCA AAATCCCAGG AGTATCTGAC GCGCGCCACC CGACGTTATT ACAGCAAAAC GCCGATGCAA ATCATTAATG AGATTCGCAT TAATTTTGCC AAGAAACAGT TGGAAATGAC CAACTATTCG GTTACGGATA TTGCTTATGA AGCCGGGTAT AGCAGTCCAA GTCTGTTTAT TAAAACGTTT AAGAAGATGA CCTCATTTAC GCCGAATAGT TATCGGAAGC GATTGACGGA AATTAATGAG TAA
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Protein sequence | MMQLQVNATE IKTVYEQQLF NGKNFHVFIY NKTESVTGLH QHDYYEFTLV LTGRYYQEIN GKRVLLERGD FVFIPVGSNH QSFYEFGATR ILNVGISKRF FEQHYLPLLP FCFVASQVYR ANSTFLTYIE TVIASLNFRG NGLDEFIEVV TFYIINRLRH YREEQVYDDI PQWLKATVEI MHDKTQFGEH ALENMVRLSA KSQEYLTRAT RRYYSKTPMQ IINEIRINFA KKQLEMTNYS VTDIAYEAGY SSPSLFIKTF KKMTSFTPNS YRKRLTEINE
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