| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2003 |
|---|
| Symbol | |
|---|
| ID | 6875201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 1935695 |
|---|
| End bp | 1936444 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642785118 |
|---|
| Product | vitamin B12-transporter ATPase |
|---|
| Protein accession | YP_002215784 |
|---|
| Protein GI | 198245265 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4138] ABC-type cobalamin transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 0.411069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAT TGATGCAATT AAAGGATGTC GCCGAGAGCA CCCGCCTGGG GCCGCTTTCC
GGCGAAGTAA GCGCAGGAGA GATCCTTCAT CTTGTCGGGC CGAACGGTGC CGGGAAAAGC
ACGCTACTGG CGCGTATGGC GGGGTTAACC TCCGGCGAGG GGAGCATCAG GTTTGGCGGA
GCGCCGCTGG AGGCATGGGC GACGGCAACG CTTGCCCAAC ACCGCGCTTA TCTTGCGCAA
CAGCAAAATC CGCCGTTCGC CATGCCGGTC TGGCATTACC TGACATTGCA TCAACCTGAT
AAAACGCGAA CCGGGCAGCT TAACGAGGTG GCCGATATGC TTGGATTGGG CGACAAACTG
GGGCGAAGCG TGAATCAGCT TTCCGGTGGC GAGTGGCAGC GTGTTCGCCT TGCTGCCGTT
GTACTACAAA TTCATCCCGA CGCTAATCCG GTCGGTCAAT TATTGCTGCT TGATGAGCCG
ATGAACAGTC TCGATGTTGC GCAACAAAAC GCTCTGGATC GGGTATTACA TCATTTGTGT
CAGGCAGGAA TTGCGATTGT GATGAGTAGC CACGATCTGA ACCACACGCT GCGCCATGCG
CATAAAGCGT GGTTATTAAA GCGCGGTAAA CTCATTGCTT GCGGCCGCCG GGAAGAGGTG
CTCACCCCCT CTTATCTGGC GCAAGCCTAC GGTCTGCGCT TTCGACGACT CGACGTCGAG
GGGCATCCAA TGCTCATTTC GGCCACTTAA
|
|---|
| Protein sequence | MSQLMQLKDV AESTRLGPLS GEVSAGEILH LVGPNGAGKS TLLARMAGLT SGEGSIRFGG
APLEAWATAT LAQHRAYLAQ QQNPPFAMPV WHYLTLHQPD KTRTGQLNEV ADMLGLGDKL
GRSVNQLSGG EWQRVRLAAV VLQIHPDANP VGQLLLLDEP MNSLDVAQQN ALDRVLHHLC
QAGIAIVMSS HDLNHTLRHA HKAWLLKRGK LIACGRREEV LTPSYLAQAY GLRFRRLDVE
GHPMLISAT
|
|---|
| |