| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1978 |
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| Symbol | |
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| ID | 6872981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1908453 |
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| End bp | 1911509 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642785095 |
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| Product | FAD linked oxidase |
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| Protein accession | YP_002215761 |
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| Protein GI | 198241853 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.000000994047 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCCAC AAATTTCTCA GGCACCCGGC GTCGTTCAGC TGGTGCTCAA TTTTTTGCAG
GCGCTGGAGC AGCAAGGGTT TACGGGCGAT ACGGCAACCA GCTATGCCGA CCGTCTGACA
ATGTCGACCG ATAACAGTAT CTACCAGCTT CTTCCCGATG CTGTTGTGTT TCCCCGTTCT
ACGGCGGATG TCGCGCTTCT TGCCCGTCTG GCGGCGGAGC CGCGCTTTAC GTCGCTGATA
TTTACCCCTC GAGGCGGCGG TACTGGCACG AATGGCCAGG CGCTAAACCA GGGCATTATT
GTTGATATGT CCCGCTATAT GAACCGCATT ATTGAAATTA ATCCTGAAGA GGGATGGGTG
CGGGTAGAGG CGGGAGTGAT AAAAGATCAG CTTAATCAAG CGTTAAAGCC GTATGGCTAT
TTTTTTGCGC CGGAACTTTC CACCAGTAAT CGCGCCACGC TTGGCGGTAT GATTAATACC
GATGCCTCCG GTCAGGGTTC GCTGGTCTAT GGAAAAACGT CAGATCACGT CTTAGGCATA
CGGGCCGTAT TGTTGGGGGG CGATATCCTT GACACGCAAT CGATGCCCGT AGAGCTTGCC
CGGACGCTGG GTGAAAACAC GACGACGCCA GGCCGCATCT ATCAGACCGT CTATCAGTCC
TGCCTGGAAA ACCGCCAACT TATCCTCGAT AGCTTTCCAA AGCTCAATCG CTTCCTGACA
GGCTACGATT TACGCCACGT CTTTAACGAT GACATGACCC GCTTCGATCT CACCCGCATC
TTAACGGGGT CGGAAGGGAC GCTGGCGTTT ATTACTGAAG CCCGGCTGGA TATTACCCCG
ATACCCAAAG TCCGCCGTCT GGTGAATGTA AAATACGACT CCTTTGATTC CGCGCTGCGT
AACGCCCCTT TTATGGTTGA CGCGCGCGCC TTATCCGTCG AGACGGTCGA TTCCAAAGTC
CTTAACCTTG CGCGGGAAGA TATTGTCTGG CACTCCGTTA GCGAATTGAT TACCGATGTG
CCGGATAAAG AGATGCTTGG CCTGAATATC GTGGAATTCG CGGGTGATGA TGAAGCGCTT
ATTGACGGAC AGGTCGAGGC GCTGTGCCAC CGGCTGGATG GCCTGATGGC GCGAGCGGAA
GCGGGCGTGA TCGGCTGGCA ACTTTGTACC GATTTGACGG GTATTGAGCG TATTTACGCG
ATGCGTAAAA AAGCGGTAGG GCTGCTGGGT AATGCGAAAG GCGCTGCCAA ACCGATTCCT
TTTGCGGAAG ATACCTGCGT GCCGCCTGAA CATCTGGCCG ATTACATCGC CGAATTTCGC
GCCCTGCTGG ATGGTCATGG CTTAAGTTAC GGCATGTTCG GCCACGTGGA TGCCGGGGTG
CTGCATGTGC GTCCGGCGCT GGATATGTGC GATCCGCAGC AGGAACTGTT GATGAAACAG
ATCTCCGATG AGGTCGTCGC GCTGACCGCC AGATACGGTG GGCTGTTGTG GGGCGAGCAT
GGAAAAGGTT TTCGTGCGGA ATACAGCCCG GCCTTTTTCG GCGAAGTTCT GTATGGCGAG
CTGCGCAAAA TAAAAGCGGC TTTTGATCCG CATAATCGAC TTAACCCGGG TAAAATCTGT
CCGCCGCAAG GGATAGAGGC GCCGATGATG AAGGTGGATG CGGTAAAACG CGGCACCTGG
GATCGGCAAA TCCCGCTGGC AGTGCGGCAG ACCTGGCGCG GCGCTATGGA GTGTAATGGT
AACGGCCTGT GCTTTAATTT CGATGCGAAA AGCCCAATGT GCCCGTCGAT GAAAATTAGC
CTTAACCGGA TCCACTCGCC GAAAGGGCGG GCGACGCTGG TGCGGGAATG GCTCCGTCTA
TTGGCCGATC GCGGCGTCGA TCCGTTGAAG CTGGAAAAGG AGTTGCCAGA AAAACGCGCC
AGCTTACGCA CGCTGATTGC CCGCACCCGG AATAGTTGGC ACAAACGCAA AGGCGAGTAT
GACTTTTCCC ATGAAGTTAA AGAGGCCATG TCCGGCTGTC TGGCGTGTAA AGCCTGTACG
ACCCAGTGTC CGATTAAAAT CGATGTTCCG GAGTTTCGTT CACGTTTCTT ACAGCTTTAC
CATACGCGTT ATCTGCGCCC GGTACGCGAT CATCTGGTGG CGACGGTCGA GACCTACGCG
CCGCTGATGG CGCGTGCGCC AAAGACCTTT AACTTTTTTA TTAACCAACC GGTGGTTCGT
AATCTGGCGA AAAAACATAT CGGTATGGTG GATTTACCTC TGCTTTCTGC CCCTTCATTG
CAACAGCAAC TGGTGGGCCA TCCGTCTGCC AATATGACGC TTGAGCAACT GGAACGCATG
AGCGCCGAGC AAAAAGCGAA AACGGTACTG GTGGTTCAGG ATCCGTTTAC CAGCTACTAC
GACGCCCGGG TCGTGGCGGA CTTTATCCGC CTGGCGGAAA AACTGGGCAG GAGGCCGGTA
TTGTTACCGT TCTCGCCGAA TGGTAAGGCG CAGCATATTA AAGGTTTTCT TAATCGCTTT
GCGAAAACGG CGAAAAAAAC CTCTGAGTTC CTTAATCGGA TCGCCGCGTT GGGGATGCCG
ATGGTGGGCG TCGATCCGGC GCTGGTTCTG TGTTATCGCG ACGAATACAA ACTGGCGCTG
GGTGAACAGC GCGGCGATTT TCATGTGTTG CTGGTGAATG AATGGCTGGC GCAGGAAATA
AATGCAAGAC TGTCCGTCGA GGTGAGCGGC GAACCGTGGT ACTTTTTTGG TCATTGTACG
GAAGTCACGG CTTTACCCGG CGCGCCTGCG CAGTGGGCCG CCATCTTTGC CCATTTTGGC
GCGAAGCTGG AAAATGTCAG CGTAGGCTGC TGCGGTATGG CGGGCACTTA TGGACATGAA
CTCACCAATC ATAAAAATTC GCTGGGAATT TATGAGCTAT CCTGGCATCA GGCGATGCAA
CGTCTACCGC GAAACCGCTG CCTGGCAACC GGCTATTCCT GCCGAAGCCA GGTTAAACGC
ATTGAAGGTA CGGGCGTGCG TCACCCGTTG CAGGCATTAC TGGAGATTAT AGGTTGA
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| Protein sequence | MIPQISQAPG VVQLVLNFLQ ALEQQGFTGD TATSYADRLT MSTDNSIYQL LPDAVVFPRS
TADVALLARL AAEPRFTSLI FTPRGGGTGT NGQALNQGII VDMSRYMNRI IEINPEEGWV
RVEAGVIKDQ LNQALKPYGY FFAPELSTSN RATLGGMINT DASGQGSLVY GKTSDHVLGI
RAVLLGGDIL DTQSMPVELA RTLGENTTTP GRIYQTVYQS CLENRQLILD SFPKLNRFLT
GYDLRHVFND DMTRFDLTRI LTGSEGTLAF ITEARLDITP IPKVRRLVNV KYDSFDSALR
NAPFMVDARA LSVETVDSKV LNLAREDIVW HSVSELITDV PDKEMLGLNI VEFAGDDEAL
IDGQVEALCH RLDGLMARAE AGVIGWQLCT DLTGIERIYA MRKKAVGLLG NAKGAAKPIP
FAEDTCVPPE HLADYIAEFR ALLDGHGLSY GMFGHVDAGV LHVRPALDMC DPQQELLMKQ
ISDEVVALTA RYGGLLWGEH GKGFRAEYSP AFFGEVLYGE LRKIKAAFDP HNRLNPGKIC
PPQGIEAPMM KVDAVKRGTW DRQIPLAVRQ TWRGAMECNG NGLCFNFDAK SPMCPSMKIS
LNRIHSPKGR ATLVREWLRL LADRGVDPLK LEKELPEKRA SLRTLIARTR NSWHKRKGEY
DFSHEVKEAM SGCLACKACT TQCPIKIDVP EFRSRFLQLY HTRYLRPVRD HLVATVETYA
PLMARAPKTF NFFINQPVVR NLAKKHIGMV DLPLLSAPSL QQQLVGHPSA NMTLEQLERM
SAEQKAKTVL VVQDPFTSYY DARVVADFIR LAEKLGRRPV LLPFSPNGKA QHIKGFLNRF
AKTAKKTSEF LNRIAALGMP MVGVDPALVL CYRDEYKLAL GEQRGDFHVL LVNEWLAQEI
NARLSVEVSG EPWYFFGHCT EVTALPGAPA QWAAIFAHFG AKLENVSVGC CGMAGTYGHE
LTNHKNSLGI YELSWHQAMQ RLPRNRCLAT GYSCRSQVKR IEGTGVRHPL QALLEIIG
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