Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1970 |
Symbol | sufD |
ID | 6872944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1901825 |
End bp | 1903096 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642785089 |
Product | cysteine desulfurase activator complex subunit SufD |
Protein accession | YP_002215755 |
Protein GI | 198244393 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0000000806248 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGGCT TACCGAACAG CAGTAAAGCG CTACAGCAAT GGCAGCATCT CTTTGAGGAA AAAAGAGAAA GTCGAACTGA GCAGGCAAGA CAACATTTAC AACAGATGTT ACGTCTGGGA TTGCCGACGC GTAAACATGA AGACTGGAAA TACACGCCGC TGGAGGGCTT AACCCATAGC CAGTTTATCC AGCAGTGTGC GACTATCAGC TCCGCACAGC GTGATGCGTT GGCGCTGCAA ATCGATGCCG TGCGGCTGTT GTTTGTCGAT GGTCGGTTTA TGCCAGAGCT CAGTGATAGC ACGCAAAACA GTGGATTTGA CGTTAGCGTC AGGGATGAGC GCCAGACGCT TGCCGCGCCG GTACAGCCTG AGGTTTTTCT GCATCTGACG GAAAGCCTGG CGCAATGTGT CACGTATATA CAGGTACGGC GAAATCAGCG TCCGACCAGG CCGCTACTGT TAATGCATAT CACGCAGGGC GTGGATGGCG ACGAGCTGAA CACCGCGCAT TATCGCCACC ATCTGGCGCT GGCGGAAGGC GCGGAAGCGA CGGTTATTGA GCATTATGTC AGCCTTACAG CGGCAAAACA TTTTACCGGC GCGCGTCTGA CGATGAACGT TGCAGACAAT GCGCAACTGC ATCATATCAA ACTGGCGTTT GAAAATGCGT CCAGCTATCA CTTTGCGCAT AACGATCTTC TGCTGGCGAC AGACGCCTCG GCGTTTAGCC ACAGTTTTCT GCTGGGCGCC GCAGTGCTAC GTCACCACAG CAGCTCACAA CTGAATGGTG AAAACGCGAC GCTTCGACTG AATAGTCTGG CGATGCCGGT GAAAAATGAA GTTTGCGATA CGCGGACATG GCTGGAACAT AACAAAGGCT ACTGTAACAG CCGCCAGTCG CACAAGACCA TCGTCAGCGA CAAAGGACGC GCGGTCTTTA ATGGCCTGAT TAACGTGGCG CAACACGCCA TTAAAACCGA CGGCCAGATG ACCAATAATA ACCTGTTGTT GGGGAAACTG GCTGAAGTCG ATACCAAACC GCAATTAGAG ATCTATGCCG ATGACGTGAA GTGCAGCCAC GGCGCGACGA TCGGGCGTAT TGACGATGAG CAGATGTTTT ATCTGCAATC ACGCGGCATC AGACAGCAGG AGGCGCGGCA CATGATTCTT TACGCGTTTG CCGCAGAGTT AACGGAAGCT ATCCATGATA GCGCCCTTAA ACAGCAGGTG CTGGCGCGAA TCGGCCAGCG ACTGCCCGGA GGCCTGGTAT GA
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Protein sequence | MAGLPNSSKA LQQWQHLFEE KRESRTEQAR QHLQQMLRLG LPTRKHEDWK YTPLEGLTHS QFIQQCATIS SAQRDALALQ IDAVRLLFVD GRFMPELSDS TQNSGFDVSV RDERQTLAAP VQPEVFLHLT ESLAQCVTYI QVRRNQRPTR PLLLMHITQG VDGDELNTAH YRHHLALAEG AEATVIEHYV SLTAAKHFTG ARLTMNVADN AQLHHIKLAF ENASSYHFAH NDLLLATDAS AFSHSFLLGA AVLRHHSSSQ LNGENATLRL NSLAMPVKNE VCDTRTWLEH NKGYCNSRQS HKTIVSDKGR AVFNGLINVA QHAIKTDGQM TNNNLLLGKL AEVDTKPQLE IYADDVKCSH GATIGRIDDE QMFYLQSRGI RQQEARHMIL YAFAAELTEA IHDSALKQQV LARIGQRLPG GLV
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