| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1960 |
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| Symbol | |
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| ID | 6874675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1891979 |
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| End bp | 1893205 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642785080 |
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| Product | putative regulatory protein |
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| Protein accession | YP_002215746 |
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| Protein GI | 198245744 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0000000520335 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAAAG AAGAAAGACG TCATGCCATC ATTAATTTAC TGATAAAGGA TAATAGTGTT
AGCGTCAGTA AACTTTCAGA CCTTTATAAG GTTAGCCAGG AGACTATTCG TTCCGATCTA
CGCTATTTCC AGAAATCAGG TATGCTTCAG CGTTGCTATG GCGGAGGGAT TTTAAACCGT
GACGCGCTGA GTAAGCTTAT CACTGAAAAT AAGATTGATA TCTCCAGCAC TATCGCCACG
CCAATCCATC AGGATGCAAA ACTGCGCCGG GAAAACCCAA AAAAAGCAGG CAAGGTGTGT
GTTTTAGGCT CATTCAATAT TGATGTTTCA GCAACCGTGC CGTGGTTTCC ACAAAGCGGA
GAATCCATTC TGGCCAGTCA ATTTGGATTC TATCCTGGCG GTAAAGGAGC CAACCAGGCT
TTAGCGGCGA ACAATGCCGG CGCTGCGGCA CATTTTATTT TTAAAGTGGG CAAAGATCAG
TTCAGCGCAT TTGCTATGAA TCATATTATT CAATCAGGTA TCGCCTCATA CAGCGCGTAT
CAAACAGATA AAGCGCCCAC CGGTAGCGCA TTGATCTATG TCTCCGCCGT GGATGGCGAT
AATATTATCG CCATCTACCC TGGCGCCAAT ATGATGCTCA CCACGCAAGA GATTAACGAG
CAACACCGTT ATATCGCCGA GTCTGACGTT ATGTTAATGC AGCTCGAAAC GAACATTGAA
GCGTTGACTG AATTTATTCG TCTGGGCAAA CAAGAAAATA AAATGATCAT GCTGAATCCT
GCCCCCTATA CGAAACAGGT GACGCATTTA TTATCTGATA TTGACATCAT CACGCCGAAT
GAAACTGAAG CCTCTTTTTT ATCCGGCGTA ACCATTACTG ATATTAATGA TGCGAAAAAA
GCCGGAAATA TTATTCTGCA ATCCGGGGTG AAAAAAGTCA TCATTACCCT TGGCGCCCGT
GGATCTCTGC TCTGTGAGCA CGCCCGCACG TTGTATATTC CTGCGTGGAG CGCCGTGGTA
AAAGATGCCG CCGGGGCCGG TGACGCTTTT AATGGCGCCT TAGCCGCCGC GCTGGCGCGA
CAAGCAGACA TGGTCGCAGC CATTCAATAT GCCTCCGCTT TCGCTTCTCT GGCGGTGGAA
CAAGTCGGTG CGTCGAGTAT GCCTCAGCAC TTGCAGGTTT TACATCGAAT GCGTACCCAA
TCTAATAAAG TCATTCACAT TAATTAA
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| Protein sequence | MFKEERRHAI INLLIKDNSV SVSKLSDLYK VSQETIRSDL RYFQKSGMLQ RCYGGGILNR
DALSKLITEN KIDISSTIAT PIHQDAKLRR ENPKKAGKVC VLGSFNIDVS ATVPWFPQSG
ESILASQFGF YPGGKGANQA LAANNAGAAA HFIFKVGKDQ FSAFAMNHII QSGIASYSAY
QTDKAPTGSA LIYVSAVDGD NIIAIYPGAN MMLTTQEINE QHRYIAESDV MLMQLETNIE
ALTEFIRLGK QENKMIMLNP APYTKQVTHL LSDIDIITPN ETEASFLSGV TITDINDAKK
AGNIILQSGV KKVIITLGAR GSLLCEHART LYIPAWSAVV KDAAGAGDAF NGALAAALAR
QADMVAAIQY ASAFASLAVE QVGASSMPQH LQVLHRMRTQ SNKVIHIN
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