Gene SeD_A1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1823 
Symbol 
ID6875326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1766349 
End bp1766876 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content49% 
IMG OID642784955 
Productcompetence damage-inducible protein A 
Protein accessionYP_002215623 
Protein GI198242488 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.617319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAG AACAGCACGA TATTGTCACC CTTGATGAAG CCGAATCCGT CGATAGCCTG 
ACAAAAAAAC TTGGTGATTT ACTGGTTAAC CAGAAACTCC GTCTGACCAC TGCAGAATCC
TGCACTGGCG GGAAACTGGC TTCAGCATTG TGCGCAGCAG AAGATACGCC CTCATTTTAC
GGTGTGGGGT ATGTCACCTT TACTGATGAA GCCAAAGCAA AAATCTTACG CGTACAACGC
CACAGCCTTG CCGAACATAC CGCCGTCAGC GAAGCGGTCG TTACTGAAAT GGCACAGGGC
GCTAAGGATC AGGCTGAGGT CAATATCAGC ATAGCGATCA GCGGCTATGG CGGTCCGGAA
GGCGGCGAAG ATGGCACGCC GGCGGGCACC GTTTGGTTTG CCTGGAATAT TAACAATACA
ACTTTTACAA GCCGACAACA TTTCAACGGA GATTGTCAGG AAGTATTAGA AAAATGCGTA
CACTTCGCCC TCGCTGAATT GCTTTTTCTG TTAACGAAGA AAGCATAA
 
Protein sequence
MRLEQHDIVT LDEAESVDSL TKKLGDLLVN QKLRLTTAES CTGGKLASAL CAAEDTPSFY 
GVGYVTFTDE AKAKILRVQR HSLAEHTAVS EAVVTEMAQG AKDQAEVNIS IAISGYGGPE
GGEDGTPAGT VWFAWNINNT TFTSRQHFNG DCQEVLEKCV HFALAELLFL LTKKA