Gene SeD_A1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1816 
Symbol 
ID6871720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1761776 
End bp1762159 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content47% 
IMG OID642784950 
ProductDNA-binding transcriptional activator MarA 
Protein accessionYP_002215618 
Protein GI198242429 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAC GCAACACTGA CGCTATTACT ATTCATAGCA TTTTGGACTG GATCGAGGAT 
AACCTGGAGT CGCCGCTCTC ACTGGAAAAA GTGTCTGAGC GTTCAGGATA TTCCAAATGG
CACCTGCAAC GGATGTTTAA AAAAGAGACC GGTCATTCAT TAGGCCAATA CATCCGCAGC
CGTAAAATGA CGGAAATCGC GCAAAAATTA AAAGAGAGCA ACGAGCCCAT TCTCTATCTG
GCGGAACGCT ATGGCTTTGA GTCACAGCAA ACATTGACCC GGACGTTCAA AAACTACTTT
GATGTGCCGC CACACAAATA CCGGATCACC AATATGCATG GCGAATCACG GTATATGCTG
CCGCTGAACC ATGGCAACTA CTAG
 
Protein sequence
MSRRNTDAIT IHSILDWIED NLESPLSLEK VSERSGYSKW HLQRMFKKET GHSLGQYIRS 
RKMTEIAQKL KESNEPILYL AERYGFESQQ TLTRTFKNYF DVPPHKYRIT NMHGESRYML
PLNHGNY