Gene SeD_A1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1792 
SymbolpqaA 
ID6871589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1737984 
End bp1739474 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content42% 
IMG OID642784927 
ProductPqaA protein 
Protein accessionYP_002215595 
Protein GI198241859 
COG category[R] General function prediction only 
COG ID[COG4287] PhoPQ-activated pathogenicity-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.1475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CATATCTCGT TGTTATCGTA CTGTTTTTCA TTTCTACAAA AGTTTATACA 
CTACTTCATA ACAACATCTT CTTTTGTCGA AACAGCCCGG AGTGTGATTT GTCTCATGTT 
CTCCCCGACT ACCGGGAGCA GATTTCAGGC ACACCGCTAA AATATACCTT GATTAATACA 
GCTCCATTAG CACAGGTGGT AGTCAGACAC TATGAATTAT TATCGCAACA CTGGTCGCCA 
GATGACATGG TAACCCCTGC GCAATGGCGA CATAACGTTG ATATTTATAT CCCTGAAACG 
GCAAAAGAGC ACCATGCTTT GGTGGTTGTA AACAACGGAA TTAATTATGA TAAAGGCGTA 
CAAATCACTG GTAAACCCGG TGATTTCCCC CAGGAAACAC TGGCAAGCAT CTCCCGTGAT 
ACGAATACCA TCGTAATATC AGTGAGTGAT ATACCTAACC AATATTTAAC CTTTCAGGAT 
GATAAAAAAC CACTGAAAGA GGACGAGAGC GTTTCCCGAA GCTGGGCATT ATTTATGGAA 
GCGCCGGAGA AACGTGAGTT AATGCCTTTA AATATTCCTA TGGTCACTGC CCTATCGCAA 
GCGATGAGAT TAGCAAAAAA GGAGTTAACG CAATGGAATA TAAATTCCTT TATCATTACA 
GGTATTTCAA AGCGTGGGTG GACCACCTGG TTGTCAGCTA TCGCCGATCC TGATGTTGAA 
GCAATTGTTC CCTTCGCCAT TGATCTACTT GATATTGATG CTTCACTTGA GCATATTTAT 
CAATCATACG GTGGAAATTG GCCCATTACA TTCTACCCCT ACTACCAGCA AGGCATAGAT 
GAGAAAATAA AATCCCCCAC ATTTACCCAA CTAAGGCAAA TAATAGATCC GTTAAGATAT 
CTCAATACTA TTTATCAACC CCGACTTGCA ATACCGAAAT ATATTATTAA TGCAAGTGGC 
GATGATTTTT TCGTACCAGA CAACACTCGC TTTTATTATA GCAAACTTCC TGGCGTAAAA 
TCATTACGTA TAGTGCCTAA TATGAACCAC TACTCAATTA ACCAGTTCGC TGAAGAAAGC 
CTCGTTCCTT TTATTAATAG GTTTCAAAGT AAAAAAACAT TACCACAGTT GATCGGCCTT 
ATTCACCACC ATCTTCTTAC GGTCTATTTC TCAGAAGCGC CGGTAAAAGT CGTTCGCTGG 
ACAGCTAACA ATCCAAATGC GCGTGATTTT CGTTATGCCT GTGGCATCCG CTATAAGCCG 
CTTACAATAG ATATTCCCGC CAACAATAAG ATCAGTATTA CGTTAAATGA ACCGAAGACA 
GGTTGGGAAG CTACCTATAT CGAAGCCACT TTTAATGATG GCTATGTCGC CACGAGTCAG 
GTTTATATTA CGCCCGATGA AAAATACCCA CAGACAGCAC CACCTTCCGT TAACGCCGCA 
TGTCAAACGT TACCGGGGCG TGGATTAGGG GAAAACGATA GCCCCGATTG A
 
Protein sequence
MKKTYLVVIV LFFISTKVYT LLHNNIFFCR NSPECDLSHV LPDYREQISG TPLKYTLINT 
APLAQVVVRH YELLSQHWSP DDMVTPAQWR HNVDIYIPET AKEHHALVVV NNGINYDKGV 
QITGKPGDFP QETLASISRD TNTIVISVSD IPNQYLTFQD DKKPLKEDES VSRSWALFME 
APEKRELMPL NIPMVTALSQ AMRLAKKELT QWNINSFIIT GISKRGWTTW LSAIADPDVE 
AIVPFAIDLL DIDASLEHIY QSYGGNWPIT FYPYYQQGID EKIKSPTFTQ LRQIIDPLRY 
LNTIYQPRLA IPKYIINASG DDFFVPDNTR FYYSKLPGVK SLRIVPNMNH YSINQFAEES 
LVPFINRFQS KKTLPQLIGL IHHHLLTVYF SEAPVKVVRW TANNPNARDF RYACGIRYKP 
LTIDIPANNK ISITLNEPKT GWEATYIEAT FNDGYVATSQ VYITPDEKYP QTAPPSVNAA 
CQTLPGRGLG ENDSPD