Gene SeD_A1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1736 
Symbol 
ID6875061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1671056 
End bp1672234 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content57% 
IMG OID642784873 
Productbenzoate transporter 
Protein accessionYP_002215541 
Protein GI198245199 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGT TATCACTGCC GTTACCTACT GTATTATCTG GTCTGGTCGC CGTTCTGGTC 
GGCTATGCAA GTTCCGCCGC CATTATCTGG CAGGCGGCGC TTGCCGCTGG CGCAACACCC
GCAGAGATCG CCGGCTGGAT GACCGCCCTC GGTATAGCCA TGGGTATAAG CACACTAACG
TTAACTTTGT GGTATCGTGC GCCGGTTTTA ACCGCCTGGT CAACGCCTGA CGCCGCTCTG
TTGGTAACAG GGCTTCAGGG ATTATCGTTG CCAGACGCCG TGGGCATATT CATTGTCGCC
AATGCCCTGA TTGTGCTGTG CGGCGTCACG GGATTGTTTG CGCGTTTGAT GCGGATAATC
CCCCATTCTC TTGCCGCCGC AATGCTGGCG GGAATACTGC TACGCTTCGG CCTGCAGGCG
TTCGGGACGC TCAACGGAGA GTTTGTCATG TGCGGCGGTA TGCTATTGGC GTGGCTACTC
TTTAAAGTAT TCGCGCCCCG CTATGCCGTT ATTGCTGCCA TGGTGATGGG AATAACGGTG
GCGCTCATCC AGGGTAAGGT GGCGATGAGC GGTATTCATT TCGCGCCGGT GTGGCCCACC
TTCGTTCCCC CCCACTTTTC ATTCGCTCAA AGCCTGAGCG TCGCGGTACC GCTCTTCCTG
GTGACGATGG CATCGCAAAA CGCCCCCGGC GTCGCCACAA TGAAGGCGTC TGGCTATCAG
CTTCCTGTCT CTCCGTTAAT GATTTTTACC GGGTTGCTGG CGCTGCTGCT TTCGCCATTT
GGCGTTTATT CTATCTGCAT TGCCGCCATT ACAGCCGCCA TTTGTCAAAG CCCGGACGCA
CACCCCGATC CAACGCGTCG CTGGTTAGCG GCCGCCGCCG CAGGCGTTTT TTATTTACTT
GCCGGGTGGT TTGGCGGTTC GATAACCGCG CTGATGGTCG CCCTGCCGGT TAGCTGGGTG
CAAATGCTGG CTGGTCTGGC ATTGTTAAGT ACGATTAGCG GTAGCCTGTA TCAGGCGCTT
ACTCACGAAA GTGAGCGTGA CGCGGCAGTT ATCGCATTTC TCGTCACCGC CAGCGGGCTA
ACGCTGATGG GCATCGGATC GGCATTCTGG GGGTTGATCG CTGGCGGAAT AGGCTACGCA
GTATTAACGA GAACGCGCCG CCCATCGTTG TCTGGCTGA
 
Protein sequence
MRLLSLPLPT VLSGLVAVLV GYASSAAIIW QAALAAGATP AEIAGWMTAL GIAMGISTLT 
LTLWYRAPVL TAWSTPDAAL LVTGLQGLSL PDAVGIFIVA NALIVLCGVT GLFARLMRII
PHSLAAAMLA GILLRFGLQA FGTLNGEFVM CGGMLLAWLL FKVFAPRYAV IAAMVMGITV
ALIQGKVAMS GIHFAPVWPT FVPPHFSFAQ SLSVAVPLFL VTMASQNAPG VATMKASGYQ
LPVSPLMIFT GLLALLLSPF GVYSICIAAI TAAICQSPDA HPDPTRRWLA AAAAGVFYLL
AGWFGGSITA LMVALPVSWV QMLAGLALLS TISGSLYQAL THESERDAAV IAFLVTASGL
TLMGIGSAFW GLIAGGIGYA VLTRTRRPSL SG