Gene SeD_A1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1645 
SymbolpspD 
ID6873693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1587524 
End bp1587742 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content56% 
IMG OID642784789 
Productperipheral inner membrane phage-shock protein 
Protein accessionYP_002215457 
Protein GI198243496 
COG category 
COG ID 
TIGRFAM ID[TIGR02979] phage shock protein PspD 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0000519347 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATACTC GCTGGCAACG CGTCGGGCAG AAGGTGAAGC CCGGCTTCAA AATAGCAGGT 
AAGCTGGTTC TGTTGACCGC GTTACGCTAC GGGCCTGCCG GCGTGGCGGG ATGGGCGGTA 
AAATCCGTCG CCCGTCGTCC GCTAAAAATG TTGCTGGCGT TTGCGCTGGA GCCAGTACTT 
CGTAAGGCGG CGAATAAAAT TTCGCAGCGT TACAAATAG
 
Protein sequence
MNTRWQRVGQ KVKPGFKIAG KLVLLTALRY GPAGVAGWAV KSVARRPLKM LLAFALEPVL 
RKAANKISQR YK