| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1641 |
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| Symbol | pspF |
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| ID | 6872600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1585039 |
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| End bp | 1586034 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784785 |
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| Product | phage shock protein operon transcriptional activator |
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| Protein accession | YP_002215453 |
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| Protein GI | 198242603 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0000132822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCGATTT TCATCATGGC TGAATTTAAA GATAACCTGC TCGGTGAGGC AAACCGTTTT
CTTGAAGTAC TGGAACAAGT CTCCCGGCTC GCGCCGCTGG ATAAGCCAGT GCTGATTATT
GGCGAACGCG GTACGGGTAA AGAACTCATC GCCAATCGCC TGCACTATCT CTCTTCACGC
TGGCAGGGGC CGCTTATCTC GCTTAACTGC GCAGCGCTTA ACGAAAATCT GCTGGACTCC
GAACTGTTTG GTCATGAAGC GGGTGCTTTT ACCGGGGCGC AAAAACGCCA TCCCGGTCGC
TTTGAACGCG CCGATGGCGG CACGCTGTTT TTGGATGAAC TGGCGACAGC GCCAATGCTG
GTACAGGAAA AGCTACTGCG GGTGATTGAA TATGGCGAGC TAGAGCGCGT CGGCGGCAGC
CAGCCGTTAC AGGTTAATGT GCGATTAGTA TGCGCCACCA ATGCCGATTT ACCCGCCATG
GTAAAGGAAG GAACATTTCG TGCCGATCTG CTCGACAGGC TGGCTTTTGA CGTTGTACAA
CTGCCGCCGC TGCGCGAACG TCAAAGCGAT ATTATGCTGA TGGCCGAGCA TTTTGCTATT
CAGATGTGTC GTGAGCTACG TCTGCCCTTA TTTCCCGGTT TTACCGATCG GGCAAAAGAA
ACGTTGTTGC ATTACGCCTG GCCGGGTAAT GTCCGCGAGC TGAAAAACGT AGTCGAACGT
TCAGTGTATC GCCACGGCAG CAGTGAACAT CCTTTGGATG AAATTGTTAT CGATCCTTTT
CAACGCCATT CCGCCGAACC GCCCACGCCC GCCCTGCCAG CGGCATCCGC CACGCCTGAC
CTGCCGCTCA AGTTGCGGGA GTTTCAACTG CAACAGGAAA AAGCGCTGCT GCAACGTAGC
TTACAACAGG CGAAATTTAA CCAGAAACGA GCCGCCGATT TGCTGGCACT CACCTACCAC
CAGTTTCGCG CCTTGCTTAA AAAGCATCAG CTTTAG
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| Protein sequence | MAIFIMAEFK DNLLGEANRF LEVLEQVSRL APLDKPVLII GERGTGKELI ANRLHYLSSR
WQGPLISLNC AALNENLLDS ELFGHEAGAF TGAQKRHPGR FERADGGTLF LDELATAPML
VQEKLLRVIE YGELERVGGS QPLQVNVRLV CATNADLPAM VKEGTFRADL LDRLAFDVVQ
LPPLRERQSD IMLMAEHFAI QMCRELRLPL FPGFTDRAKE TLLHYAWPGN VRELKNVVER
SVYRHGSSEH PLDEIVIDPF QRHSAEPPTP ALPAASATPD LPLKLREFQL QQEKALLQRS
LQQAKFNQKR AADLLALTYH QFRALLKKHQ L
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