| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1640 |
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| Symbol | |
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| ID | 6872874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1583278 |
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| End bp | 1584927 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784784 |
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| Product | peptide transport periplasmic protein SapA |
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| Protein accession | YP_002215452 |
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| Protein GI | 198243286 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00000341731 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCCTGG TTTTATCGTC TCTGATCGTG ATAGCGGGTC TACTGAGTAG TCAGGCTACG
GCTGCGGCTG CGCCCGAACA AACTGCGAGT GCAGATATTC GCGATAGCGG CTTTGTGTAT
TGTGTCAGCG GGCAGGTCAA CACCTTTAAT CCGCAAAAAG CGAGCAGCGG CCTCATCGTC
GATACCCTGG CAGCCCAGTT ATATGACCGC CTGTTGGATG TCGATCCCTA TACTTATCGT
TTAGTCCCAG AGCTGGCAGA AAGCTGGGAA GTGCTGGATA ACGGGGCAAC GTACCGTTTT
CACCTGCGCC GCGACGTTTC CTTTCAAAAA ACCGCCTGGT TTACGCCGAC CCGAAAACTC
AATGCTGATG ATGTCGTCTT TACCTTTCAG CGGATTTTTG ATCGTCGGCA TCCGTGGCAT
AACATCAACG GCAGTAGCTT CCCCTACTTT GATAGCCTAC AGTTCGCCGA CAATGTAAAA
AGCGTGCGTA AGCTGGACAA TAACACCGTT GAGTTTCGCC TGACGCAGCC AGACGCCTCC
TTTTTATGGC ATCTGGCTAC ACACTACGCT TCCGTCATGT CCGCTGAGTA CGCCGCGCAG
CTTAGCCGAA AAGATCGTCA GGAACTGCTA GACCGCCAAC CGGTCGGCAC CGGGCCTTTC
CAGCTTTCGG AGTACCGTGC CGGACAGTTT ATTCGTCTCC AGCGCCACGA TGGGTTTTGG
CGCGGCAAAC CGCTGATGCC GCAAGTGGTA GTGGATTTAG GCTCCGGCGG TACCGGGCGT
TTATCGAAAT TACTGACCGG TGAATGCGAT GTTCTGGCCT GGCCCGCCGC CAGCCAGCTA
ACTATTTTAC GCGACGATCC GCGTTTACGT CTGACGTTGC GCCCGGGGAT GAATATCGCC
TATCTGGCCT TTAACACCGA TAAGCCGCCG TTGAATAATC CCGCAGTGCG CCATGCGCTG
GCCTTATCGA TCAACAACCA GCGTCTGATG CAGTCGATTT ATTACGGCAC GGCGGAAACC
GCAGCCTCCA TTTTACCGAG AGCCTCATGG GCTTACGATA ACGATGCCAA AATTACGGAG
TACAATCCGG AAAAATCGCG CGAACAGCTA AAAGCGCTGG GCATTGAGAA TCTTACGCTG
CATCTCTGGG TGCCGACCAG TTCTCAGGCC TGGAACCCAA GTCCGCTAAA AACGGCGGAG
CTTATTCAGG CGGATATGGC GCAGGTTGGC GTAAAAGTGG TCATTGTGCC GGTTGAAGGT
CGTTTTCAGG AGGCGCGCCT GATGGATATG AATCACGATC TGACCTTATC CGGCTGGGCC
ACGGACAGCA ACGATCCGGA TAGCTTTTTC AGACCACTGT TAAGCTGTGC GGCCATCAAT
TCGCAAACCA ATTTCGCCCA CTGGTGTAAC CCTGAATTTG ACAGCGTGCT GCGTAAAGCA
CTGTCGTCGC AGCAGTTGGC TTCGCGCATA GAAGCATATG AGGAAGCGCA GAATATCCTG
GAGAAAGAGC TGCCGATACT GCCGCTGGCA TCATCACTAC GCCTGCAGGC TTACCGCTAC
GATATTAAAG GGCTGGTGTT AAGCCCGTTC GGCAATGCGT CTTTTGCCGG CGTCTCCCGC
GAAAAACACG AAGAGGTGAA AAAACCATGA
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| Protein sequence | MRLVLSSLIV IAGLLSSQAT AAAAPEQTAS ADIRDSGFVY CVSGQVNTFN PQKASSGLIV
DTLAAQLYDR LLDVDPYTYR LVPELAESWE VLDNGATYRF HLRRDVSFQK TAWFTPTRKL
NADDVVFTFQ RIFDRRHPWH NINGSSFPYF DSLQFADNVK SVRKLDNNTV EFRLTQPDAS
FLWHLATHYA SVMSAEYAAQ LSRKDRQELL DRQPVGTGPF QLSEYRAGQF IRLQRHDGFW
RGKPLMPQVV VDLGSGGTGR LSKLLTGECD VLAWPAASQL TILRDDPRLR LTLRPGMNIA
YLAFNTDKPP LNNPAVRHAL ALSINNQRLM QSIYYGTAET AASILPRASW AYDNDAKITE
YNPEKSREQL KALGIENLTL HLWVPTSSQA WNPSPLKTAE LIQADMAQVG VKVVIVPVEG
RFQEARLMDM NHDLTLSGWA TDSNDPDSFF RPLLSCAAIN SQTNFAHWCN PEFDSVLRKA
LSSQQLASRI EAYEEAQNIL EKELPILPLA SSLRLQAYRY DIKGLVLSPF GNASFAGVSR
EKHEEVKKP
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