Gene SeD_A1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1621 
Symbol 
ID6871214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1565608 
End bp1565916 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content51% 
IMG OID642784766 
Producthypothetical protein 
Protein accessionYP_002215434 
Protein GI198244725 
COG category[S] Function unknown 
COG ID[COG3771] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000478704 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value6.99573e-22 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAAATATT TACTCATTTT CTTACTGGTA TTGGCGATTT TTGTTATTTC GGTGACGCTG 
GGCGCGCAGA ATGATCAACA GGTGACGTTT AACTACCTGC TGGCGCAAGG GGAGTATCGT 
ATCTCCACGT TGCTTGCTGT GTTGTTCGCC GTCGGTTTTG CGATTGGCTG GCTGATTTGC 
GGCCTGTTCT GGCTGCGGGT CCGCGTTTCC CTTGCCCGTG CTGAACGTAA AATTAAACGA 
CTGGAAAACA AGCTCTCGCC AGCAACCGAC GTTGCGGTCC CTGCCGACTC GTCGGTTGTA 
AAGGAATAA
 
Protein sequence
MKYLLIFLLV LAIFVISVTL GAQNDQQVTF NYLLAQGEYR ISTLLAVLFA VGFAIGWLIC 
GLFWLRVRVS LARAERKIKR LENKLSPATD VAVPADSSVV KE