Gene SeD_A1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1560 
SymbolnarH 
ID6872349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1510158 
End bp1511696 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content56% 
IMG OID642784712 
Productnitrate reductase 1 subunit beta 
Protein accessionYP_002215382 
Protein GI198243341 
COG category[C] Energy production and conversion 
COG ID[COG1140] Nitrate reductase beta subunit 
TIGRFAM ID[TIGR01660] nitrate reductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.713297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC GTTCACAAGT CGGCATGGTG CTGAATCTCG ATAAGTGCAT CGGCTGTCAT 
ACCTGTTCAG TCACCTGTAA AAACGTCTGG ACCAGTCGCG AAGGTATGGA ATACGCGTGG
TTCAACAACG TAGAAAGTAA GCCTGGCGTT GGTTTTCCGA ATGACTGGGA AAATCAGGAA
AAATGGAAAG GCGGCTGGAT CCGCAAAATC AACGGCAAAC TACAGCCGCG CATGGGCAAC
CGGGCGCTGC TGCTGGGTAA AATCTTCGCT AACCCGCATC TGCCGGGCAT CGACGACTAC
TACGAGCCGT TTGATTACGA CTACCAGAAC CTGCATACCG CGCCGGAAGG CAGCAAACAT
CAGCCGATCG CGCGTCCGCG CTCGCTGATT ACCGGCCAGC GGATGGACAA AATTACCAGC
GGGCCAAACT GGGAAGAGAT TCTGGGCGGC GAGTTCGAAA AACGCGCCAA AGACCAGAAC
TTCGAAAACA TGCAGAAGGC GATGTACGGC CAGTTCGAAA ACACCTTCAT GATGTACTTG
CCGCGCCTGT GCGAGCACTG CCTCAATCCG GCGTGCGTGG CGACCTGCCC AAGCGGTGCC
ATCTACAAGC GTGAAGAAGA CGGCATTGTG CTGATCGACC AGGACAAGTG CCGCGGCTGG
CGGATGTGTA TTACCGGCTG CCCGTACAAG AAGATCTACT TCAACTGGAA GAGCGGCAAA
TCTGAAAAAT GCATCTTCTG CTATCCGCGT ATTGAAGCGG GTCAGCCGAC TGTTTGCTCG
GAAACCTGCG TGGGCCGTAT CCGTTATCTT GGCGTACTGC TGTATGACGC CGATGCCATT
GAAAGCGCCG CCAGTACGGA AAACGAAAAA GATCTGTACC AGCGTCAACT GGACGTGTTC
CTCGATCCGA ACGATCCGGC TGTCATTGAG CAGGCGCTGA AGGACGGCGT GCCGCAGAGC
GTGATCGATG CGGCGCAGCA ATCGCCAGTA TACAAAATGG CGATGGACTG GAAGCTGGCG
CTGCCGCTGC ATCCGGAATA CCGCACGCTG CCGATGGTCT GGTACGTGCC GCCTTTGTCA
CCGATTCAGT CTGCCGCCGA CGCGGGTGAA CTGGGCAGCA ACGGTATTCT GCCGGATGTA
GACAGTCTGC GTATCCCGGT GCAGTACCTG GCGAATTTGT TGACCGCTGG CGACACTCAG
CCGGTACTGT TGGCGCTGAA ACGGATGCTG GCGATGCGTC ACTACAAACG TGCGGAAACC
GTAGACGGTA AAGTGGATAC CCGCGCGCTG GAAGAGGTGG GTTTAAGCGA AGCCCAGGCG
CAGGAAATGT ATCGTTACCT GGCAATTGCT AATTATGAAG ATCGCTTTGT GGTGCCGAGC
AGCCATCGTG AACTGGCGCG TGACGCATTC CCGGAGAAAA GCGGTTGTGG CTTTACCTTC
GGCGATGGTT GCCACGGGTC TGATACCAAA TTCAATCTGT TCAACAGCCG CCGCATCGAC
GCTGTTGATG TGACCAGCAA AACGGAGCCG CACGCATGA
 
Protein sequence
MKIRSQVGMV LNLDKCIGCH TCSVTCKNVW TSREGMEYAW FNNVESKPGV GFPNDWENQE 
KWKGGWIRKI NGKLQPRMGN RALLLGKIFA NPHLPGIDDY YEPFDYDYQN LHTAPEGSKH
QPIARPRSLI TGQRMDKITS GPNWEEILGG EFEKRAKDQN FENMQKAMYG QFENTFMMYL
PRLCEHCLNP ACVATCPSGA IYKREEDGIV LIDQDKCRGW RMCITGCPYK KIYFNWKSGK
SEKCIFCYPR IEAGQPTVCS ETCVGRIRYL GVLLYDADAI ESAASTENEK DLYQRQLDVF
LDPNDPAVIE QALKDGVPQS VIDAAQQSPV YKMAMDWKLA LPLHPEYRTL PMVWYVPPLS
PIQSAADAGE LGSNGILPDV DSLRIPVQYL ANLLTAGDTQ PVLLALKRML AMRHYKRAET
VDGKVDTRAL EEVGLSEAQA QEMYRYLAIA NYEDRFVVPS SHRELARDAF PEKSGCGFTF
GDGCHGSDTK FNLFNSRRID AVDVTSKTEP HA