Gene SeD_A1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1559 
SymbolnarG 
ID6872819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1506418 
End bp1510161 
Gene Length3744 bp 
Protein Length1247 aa 
Translation table11 
GC content56% 
IMG OID642784711 
Productnitrate reductase 1 subunit alpha 
Protein accessionYP_002215381 
Protein GI198243056 
COG category[C] Energy production and conversion 
COG ID[COG5013] Nitrate reductase alpha subunit 
TIGRFAM ID[TIGR01580] respiratory nitrate reductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.10034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.468525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT TCCTGAACCG GTTTCGCTAC TTCAAGCAGA AGGGCGAAAC CTTTGCCGAT 
GGGCACGGCC AGCTTCTCGA AACAAACCGG GACTGGGAGG ACGGATACCG CCAACGTTGG
CAGCATGACA AAATTGTGCG CTCAACCCAT GGGGTGAACT GCACCGGTTC TTGTAGCTGG
AAAATTTATG TCAAAAATGG TCTGGTGACC TGGGAAACAC AGCAAACCGA TTACCCACGC
ACCCGTCCCG ATATGCCAAA CCATGAACCT CGCGGCTGCC CGCGCGGCGC AAGCTACTCC
TGGTATCTCT ACAGCGCTAA CCGACTGAAA TATCCGCTGA TGCGCAAACG TCTGATGAAG
ATGTGGCGCG AGGCGAAAAA ACTGCATCGC GATCCGGTAG AGGCATGGGC CTCCATCATT
GAAGATGCCG ATAAAGCCAA AAGCTTCAAA CAGGCGCGTG GTCGTGGCGG CTTTGTTCGC
TCCTCATGGC AGGAAGTGAA CGAACTGATC GCCGCTTCCA ACGTGTACAC CGTGAAAACC
TATGGCCCTG ACCGCGTCGC GGGCTTCTCA CCCATCCCGG CGATGTCGAT GGTTTCCTAC
GCTTCCGGCG CACGTTATCT TTCACTGATT GGCGGTACCT GCCTGAGCTT CTACGACTGG
TACTGCGATC TGCCGCCAGC CTCCCCGCAA ACCTGGGGCG AGCAGACCGA CGTGCCGGAA
TCCGCTGACT GGTACAACTC CAGCTATATT ATCGCCTGGG GCTCTAACGT GCCGCAAACC
CGTACGCCGG ATGCCCACTT CTTTACCGAA GTACGTTACA AAGGCACTAA AACCGTCGCG
GTGACGCCGG ACTATGCTGA AATCGCCAAA CTGTGCGATC TGTGGCTGGC GCCGAAGCAG
GGGACCGATG CGGCGATGGC GCTGGCGATG GGCCACGTCA TGCTGCGCGA GTTCCACCTC
GACAACCCGC GCCAGTACTT CACCGATTAT GTCCGTCGCT ATACCGACAT GCCAATGCTG
GTGATGCTTG AAGAGCGTGA TGGTTATTAT GCCGCAGGTC GTATGCTGCG CGCTGCCGAT
CTCGTTGATT CGCTGGGGCA GGAAAATAAC CCGGAATGGA AAACCGTCGC TATCAACAGC
AACGGTGAAA TGGTGGCGCC AAACGGTTCA ATTGGTTTCC GCTGGGGCGA AAAAGGCAGA
TGGAACCTCG AACAGCGCGA CGGGACTACC GGTGCAGAAA CTGAATTGCA GCTCAGCTTG
CTGGGCAGCC AGGATGAGAT TGCTGACGTG GGCTTCCCGT ATTTCGGCGG CGAGGGTTCA
GAGTACTTTA ATCATGTGGC GCTGGATAAC GTCCTGCTGC ATAAACTGCC GGCAAAACGT
CTGCAACTGG CCGATGGTTC TTCAGCGTTA GTCACCACCG TGTATGACCT GACCATGGCG
AACTATGGTC TGGAACGCGG CCTGAACGAT GAAAATTGTG CCGCCAGTTA TGATGATACC
AAAGCGTATA CGCCAGCATG GGCCGAGCAG ATCACCGGCG TGCCGCGGGC GCAGATCATC
CGTATCGCAC GGGAGTTCGC CGATAACGCG GACAAAACGC ACGGGCGTTC AATGATTATC
GTTGGCGCCG GTCTGAACCA CTGGTATCAC CTCGATATGA ACTATCGCGG GCTGATCAAT
ATGTTGGTGT TCTGTGGTTG CGTTGGTCAG AGCGGCGGCG GTTGGGCGCA CTACGTCGGC
CAGGAAAAAC TGCGTCCGCA GACCGGCTGG CAGCCGCTGG CGTTTGCCCT TGACTGGCAG
CGTCCGGCGC GTCACATGAA TAGCACCTCT TACTTCTATA ACCACTCCAG CCAGTGGCGC
TACGAGACGG TGACCGCCGA GGAATTACTG TCGCCGATGG CGGACAAATC CCGCTATAGC
GGCCATCTGA TTGACTTCAA TGTGCGCGCC GAGCGTATGG GCTGGTTGCC GTCGGCACCG
CAGTTAGGTA CCAACCCGCT GTATATTGCG CGTGAAGCGG AAAAAGCCGG TATGACGCCG
GTAGATTATA CCGTCAAATC CCTGAAAGAG GGTTCGATTC GCTTTGCCGC CGAGCAGCCG
GAAAACGGTA AAAACCACCC GCGTAACCTG TTCATCTGGC GTTCAAACCT GCTTGGGTCT
TCCGGTAAAG GTCACGAGTA TATGCTGAAA TATCTGCTGG GTACTGAGCA TGGTATTCAG
GGGCTGGATC TGGGTAAACA GGGCGGTGTG AAGCCGGAAG AAGTGGAGTG GCGTGACAAT
GGCCTGGACG GCAAACTGGA TCTGGTGGTG ACGCTGGACT TCCGCCTGTC GAGCACCTGC
CTGTACTCCG ATATCGTACT GCCGACCGCC ACCTGGTATG AAAAAGACGA TATGAATACC
TCGGATATGC ATCCGTTTAT TCATCCGCTG TCTGCCGCCG TAGATCCGGC CTGGGAATCG
AAAAGCGACT GGGAAATCTA CAAAGGCATT GCGAAGAAAT TCTCCGAAGT CTGTGTAGGT
CACCTGGGTA AAGAGACTGA CGTCGTGACG CTGCCGATCC AGCACGATTC TGCCGCTGAA
CTGGCGCAGC CGCTGGACGT GAAAGACTGG AAAAAAGGCG AATGCGATCT GATTCCAGGG
AAAACCGCGC CGCACATCAT GACCGTTGAG CGCGATTACC CGGCGACTTA CGAACGCTTT
ACCTCTATCG GCCCGCTGAT GGAGAAAATC GGCAACGGCG GGAAAGGGAT TGCCTGGAAC
ACGCAGAGCG AAATGGACTT GCTGCGTAAG CTCAATTACA CCAAAGCGGA CGGTCCGGCG
AAAGGCCAGC CGATGCTCAA CACGGCGATT GACGCGGCAG AGATGATCCT GACGTTAGCG
CCGGAAACCA ACGGTCAGGT GGCGGTGAAA GCCTGGGCGG CGCTGAGCGA GTTTACCGGT
CGCGACCATA CGCATCTGGC AACCAATAAA GAAGAAGAGA AAATCCGCTT CCGCGATATT
CAGGCCCAGC CGCGCAAAAT TATCTCCAGC CCGACCTGGT CTGGTCTGGA AGATGAGCAT
GTTTCTTATA ACGCCGGTTA TACCAACGTT CACGAGCTGA TCCCGTGGCG TACGCTGTCT
GGTCGTCAAC AGTTGTATCA GGATCACCAG TGGATGCGCG ACTTCGGCGA AAGTCTGCTG
GTGTATCGCC CACCGATCGA CACCCGCTCG GTGAAAGCGG TGATGGGGCG TAAATCCAAC
GGTAATCCGG AGAAGGCGCT CAACTTCCTG ACGCCGCACC AGAAATGGGG TATCCACTCG
ACCTACAGCG ATAACCTGTT GATGCTGACC TTGTCGCGTG GCGGCCCGAT TGTATGGATG
AGCGAAACCG ACGCCAAAGA TCTGGGCATT GAAGATAACG ACTGGATCGA AGTCTTCAAC
AGCAACGGCG CATTGACCGC ACGCGCAGTG GTCAGCCAGC GTGTACCGAC GGGCATGACC
ATGATGTACC ACGCGCAGGA ACGTATCGTA AACCTGCCGG GGTCGGAAAT TACCCAGCAG
CGCGGCGGTA TTCATAACTC GGTGACGCGC ATTACGCCGA AACCGACCCA TATGATCGGC
GGCTATGCGC AGTTAGCCTA CGGCTTTAAC TACTACGGTA CCGTCGGCTC CAACCGCGAT
GAGTTTGTGG TGGTACGTAA GATGAAGAAC ATTAACTGGT TGGATGGCGA AGGCAATGAC
CAGGTACAGG AGAGCGTAAA ATGA
 
Protein sequence
MSKFLNRFRY FKQKGETFAD GHGQLLETNR DWEDGYRQRW QHDKIVRSTH GVNCTGSCSW 
KIYVKNGLVT WETQQTDYPR TRPDMPNHEP RGCPRGASYS WYLYSANRLK YPLMRKRLMK
MWREAKKLHR DPVEAWASII EDADKAKSFK QARGRGGFVR SSWQEVNELI AASNVYTVKT
YGPDRVAGFS PIPAMSMVSY ASGARYLSLI GGTCLSFYDW YCDLPPASPQ TWGEQTDVPE
SADWYNSSYI IAWGSNVPQT RTPDAHFFTE VRYKGTKTVA VTPDYAEIAK LCDLWLAPKQ
GTDAAMALAM GHVMLREFHL DNPRQYFTDY VRRYTDMPML VMLEERDGYY AAGRMLRAAD
LVDSLGQENN PEWKTVAINS NGEMVAPNGS IGFRWGEKGR WNLEQRDGTT GAETELQLSL
LGSQDEIADV GFPYFGGEGS EYFNHVALDN VLLHKLPAKR LQLADGSSAL VTTVYDLTMA
NYGLERGLND ENCAASYDDT KAYTPAWAEQ ITGVPRAQII RIAREFADNA DKTHGRSMII
VGAGLNHWYH LDMNYRGLIN MLVFCGCVGQ SGGGWAHYVG QEKLRPQTGW QPLAFALDWQ
RPARHMNSTS YFYNHSSQWR YETVTAEELL SPMADKSRYS GHLIDFNVRA ERMGWLPSAP
QLGTNPLYIA REAEKAGMTP VDYTVKSLKE GSIRFAAEQP ENGKNHPRNL FIWRSNLLGS
SGKGHEYMLK YLLGTEHGIQ GLDLGKQGGV KPEEVEWRDN GLDGKLDLVV TLDFRLSSTC
LYSDIVLPTA TWYEKDDMNT SDMHPFIHPL SAAVDPAWES KSDWEIYKGI AKKFSEVCVG
HLGKETDVVT LPIQHDSAAE LAQPLDVKDW KKGECDLIPG KTAPHIMTVE RDYPATYERF
TSIGPLMEKI GNGGKGIAWN TQSEMDLLRK LNYTKADGPA KGQPMLNTAI DAAEMILTLA
PETNGQVAVK AWAALSEFTG RDHTHLATNK EEEKIRFRDI QAQPRKIISS PTWSGLEDEH
VSYNAGYTNV HELIPWRTLS GRQQLYQDHQ WMRDFGESLL VYRPPIDTRS VKAVMGRKSN
GNPEKALNFL TPHQKWGIHS TYSDNLLMLT LSRGGPIVWM SETDAKDLGI EDNDWIEVFN
SNGALTARAV VSQRVPTGMT MMYHAQERIV NLPGSEITQQ RGGIHNSVTR ITPKPTHMIG
GYAQLAYGFN YYGTVGSNRD EFVVVRKMKN INWLDGEGND QVQESVK