Gene SeD_A1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1549 
Symbol 
ID6874884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1496084 
End bp1496461 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content52% 
IMG OID642784701 
Productputative transcriptional regulator 
Protein accessionYP_002215371 
Protein GI198244836 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.128221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA CGCTTCATCT TATCTGTGTT GCGCTCTCCG TCAGTTTGTT TGTCGCTCGT 
TACTGGTGGC GCTATTGCGG CCATGCGTTG GCCGCCGCGC GCTGGACACG AATCGTGCCT 
CCCGTCATAG ATACCCTGTT ACTGCTTAGC GGTATTGGGT TAATCGTTAA AACGCACATC 
CTGCCATTCA CGGAGTCGGG CTCATGGCTG ACTGAAAAAC TGTTTGGCGT TATCATCTAC 
ATCGTTTTGG GTTTTATTGC GCTTGATTAT CGTCAGGCGC GCAGCCAGCA GGCGCGTTTT 
ATCGCTTTCC CGCTGGCGCT GGTGGTGCTG TACATCATCA TTAAACTCGC CACCACAAAA 
ATACCGTTAC TGGGGTAA
 
Protein sequence
MLLTLHLICV ALSVSLFVAR YWWRYCGHAL AAARWTRIVP PVIDTLLLLS GIGLIVKTHI 
LPFTESGSWL TEKLFGVIIY IVLGFIALDY RQARSQQARF IAFPLALVVL YIIIKLATTK 
IPLLG