Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1470 |
Symbol | prc |
ID | 6872000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1424522 |
End bp | 1426570 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642784626 |
Product | carboxy-terminal protease |
Protein accession | YP_002215296 |
Protein GI | 198244506 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) [TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0690257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.257685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTT TTTTTAGGCT TACCGCGTTA GCTGGCCTGC TTGCATTAGC AGGCCAGTCC TTCGCCGTGG AAGATATTAC GCGTGCCGAT CAAATTCCCG TACTAAAGGA AGAGACGCAA CATGCGACGG TGAGCGAGCG CGTAACGTCG CGTTTTACCC GCTCCCACTA TCGCCAGTTC GATCTGGATG AGGCATTTTC GGCAAAGATC TTTGATCGCT ATCTGAATCT TCTCGACTAT AGCCACAACG TTTTGTTGGC GAGCGATGTC GAGCAGTTTG CGAAAAAGAA AACCGTGTTG GGCGATGAGC TGCGCACGGG TAAGCTGGAT GTTTTTTACG ATCTTTATAA CCTGGCGCAA AAGCGCCGGT TTGAACGTTA CCAGTACGCG CTAAAAGTGC TGGAACGGCC AATGGATTTC ACCGGAAACG ATACGTTTAA CCTGGACCGC AGTAAAGCGC CCTGGCCGAA AGATGAGGCT GAGCTAAATG CGCTGTGGGA TGGTAAAGTG AAATTCGATG AGCTCAGTCT GAAACTCACC GGCAAGAGCG ACAAAGAAAT TCGCGAAACG CTGACGCGTC GCTACAAATT CGCTATTCGC CGCCTGGCGC AGACCAACAG TGAAGATGTG TTCTCGCTGG CGATGACCGC TTTTGCGCGT GAAATCGACC CGCATACGAA TTATCTTTCT CCCCGCAATA CCGAGCAGTT TAATACCGAA ATGAGCCTGT CTCTGGAAGG TATCGGCGCG GTGCTGCAAA TGGATGACGA TTACACTGTC ATTAACTCAT TGGTCGCCGG CGGCCCAGCA GCGAAGAGCA AGTCGATTAG CGTCGGCGAT CGTATCGTCG GCGTAGGGCA GGCCGGAAAA CCGATGGTCG ACGTCATTGG CTGGCGTCTT GACGATGTGG TGGCGCTGAT CAAAGGGCCA AAAGGCAGCA AGGTCCGACT GGAAATACTG CCGGCTGGTA AAGGGACGAA AACGCGTATC ATCACGCTGA CGCGTGAACG GATTCGTCTT GAAGATCGCG CGGTTAAAAT GTCGGTGAAA ACCGTCGGCA AGGAAAAAGT TGGCGTACTG GATATTCCAG GCTTCTATGT TGGCTTGACC GATGATGTCA AAGTTCAGCT TCAGAAGCTG GAAAAACAGA ATGTTAACAG CATCGTTATC GATCTGCGTT CAAACGGCGG TGGGGCGCTG ACGGAAGCCG TTTCGCTTTC CGGTCTGTTT ATCCCTTCTG GTCCGATAGT TCAGGTGCGC GACAATAACG GCAAAGTGCG TGAGGATAGC GACACCGACG GCGTGGTCTA CTACAAAGGC CCGCTGGTGG TGCTGGTCGA TCGTTTCAGT GCCTCGGCAT CGGAAATCTT CGCTGCCGCG ATGCAGGATT ATGGTCGCGC GCTGATTGTC GGTGAGCCGA CCTTCGGTAA AGGGACGGTA CAGCAATATC GTTCGCTAAA CCGAATTTAC GATCAGATGC TTCGCCCGGA ATGGCCTGCG CTGGGTTCGG TGCAGTACAC CATTCAGAAG TTTTACCGTG TCAACGGCGG TAGTACGCAG CGTAAAGGGG TCACGCCGGA TATCATCATG CCGACTGGCA ATGAAGAGAC GGAAACCGGA GAAAAATTTG AAGATAACGC CTTGCCGTGG GATAGCATTG ATGCGGCGAA ATACGTGAAA TCGGACGATT TGGCCCCGTT TGGCCCGGAA TTATTGAAAG AACACAACGC GCGTATCGCC AAAGATCCTG AGTTTCAGTA CATCATGAAG GATATTGCAC GTTTCAATGC CATGAAGGAT AAGCGCAACA TCGTCTCTCT GAATTATGCG CAGCGTGAGA AAGAGAACAA TGAAGAAGAC GCTCTGCGTC TGGCGCGTAT TAACGATCGG TTTAAACGTG AGGGTAAACC GTTGCTGAAG AAACTGGACG ATCTGCCAAA GGATTACCAG GAGCCGGACC CGTACCTTGA TGAAACGGTG AAGATTGCTC TGGACCTGGC GCATCTTGAA AAAGAAAAAC CAGCGGAGCA GGCGGCAGCC AATAAGTAA
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Protein sequence | MNTFFRLTAL AGLLALAGQS FAVEDITRAD QIPVLKEETQ HATVSERVTS RFTRSHYRQF DLDEAFSAKI FDRYLNLLDY SHNVLLASDV EQFAKKKTVL GDELRTGKLD VFYDLYNLAQ KRRFERYQYA LKVLERPMDF TGNDTFNLDR SKAPWPKDEA ELNALWDGKV KFDELSLKLT GKSDKEIRET LTRRYKFAIR RLAQTNSEDV FSLAMTAFAR EIDPHTNYLS PRNTEQFNTE MSLSLEGIGA VLQMDDDYTV INSLVAGGPA AKSKSISVGD RIVGVGQAGK PMVDVIGWRL DDVVALIKGP KGSKVRLEIL PAGKGTKTRI ITLTRERIRL EDRAVKMSVK TVGKEKVGVL DIPGFYVGLT DDVKVQLQKL EKQNVNSIVI DLRSNGGGAL TEAVSLSGLF IPSGPIVQVR DNNGKVREDS DTDGVVYYKG PLVVLVDRFS ASASEIFAAA MQDYGRALIV GEPTFGKGTV QQYRSLNRIY DQMLRPEWPA LGSVQYTIQK FYRVNGGSTQ RKGVTPDIIM PTGNEETETG EKFEDNALPW DSIDAAKYVK SDDLAPFGPE LLKEHNARIA KDPEFQYIMK DIARFNAMKD KRNIVSLNYA QREKENNEED ALRLARINDR FKREGKPLLK KLDDLPKDYQ EPDPYLDETV KIALDLAHLE KEKPAEQAAA NK
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