Gene SeD_A1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1428 
Symbol 
ID6874986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1395460 
End bp1396029 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content49% 
IMG OID642784591 
Productphage tail assembly protein 
Protein accessionYP_002215261 
Protein GI198245077 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.220507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTA AAATGAGCGA ACAGGCGCAG ACAATTAAAA TTTTTAATCT TCGTTCAGAT 
ACAAACGAAT TTATTGGCTC AGGTGATGCA TATATCCCGC CGCACACTGG ATTACCGGCA 
AACTGTACTG ATATCGCCCC TCCTGATATT CCCTCCAGTC ATATTGCTGT ATTTGACGCT 
GAAACCCAGA CATGGAGTCT GCAGGAGGAT CACCGCGGCG AGACGGTTTA CGACACAACA 
ACCGGCAATC AGGTTTATAT CTCCGAACTC GGCCCGTTGC CCGAAAACGT CACATCAGTT 
TCACCAGACG GTGAATACCA GAAATGGGAT GGTAAGGCGT GGGTGAAGGA TGAAGCGGCT 
GAAAAAGCAG CGCAGCTTCG TCAGGCGGAA GAAACCAAAA GCAGGCTCCT GCAAATGGCA 
TCTGAAAAAA TCGCGCCGCT TCAGGATGCG GTTGATCTTG GACTCGCAAC AGATGATGAG 
AAAGCGCAGC TCGACGAATG GAAAAAATAC AGGGTGCTGG TAAACCGGGT GGATACCTTA 
AATCCTGACT GGCCGGAGAA ACCATCTTAG
 
Protein sequence
MTFKMSEQAQ TIKIFNLRSD TNEFIGSGDA YIPPHTGLPA NCTDIAPPDI PSSHIAVFDA 
ETQTWSLQED HRGETVYDTT TGNQVYISEL GPLPENVTSV SPDGEYQKWD GKAWVKDEAA 
EKAAQLRQAE ETKSRLLQMA SEKIAPLQDA VDLGLATDDE KAQLDEWKKY RVLVNRVDTL 
NPDWPEKPS