Gene SeD_A1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1372 
Symbol 
ID6873495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1348321 
End bp1348977 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content53% 
IMG OID642784540 
Productcarbon-nitrogen family hydrolase 
Protein accessionYP_002215210 
Protein GI198244596 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000000000282362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTCCT GGAAAATTGC TGCTGCGCAG TATGCGCCCC TGAACGCCTC GCCGGCGGAG 
CATGTCGCCC ATCATCTGGA ATATATTGAG CTTGCGGCTC GTCAACAGTG CGAACTGCTG 
GTCTTTCCGT CGCTGTCGCT ATTAGGCTGC GACGAAAGGA ATAAATCGTT GCCCGCCCCG 
CCTGACGAGG CGCTTTTACA GCCGCTCACT CATGCGGCCG ATACCCATCA TATGACTATC 
ATTGTGGGTA TGCCTGTTGA GCATAACTGC CGCTTCGTAA AAGGCATCGC TATTTTTGCC 
CCATGGCTAA CGTCGCCGCT CATGTTTCAC AAAAGTCATG GCGCCTGTAT TGCCAGGCAG 
CGAAGCGCTA TCAACGTGGT GGATGAGCAG CCAGAAGGTG GTGATATAGA TCCCTCATTT 
ACGTTATTCA CAACCAGTCA ATGTCTTAAC GAACCTGAAC TCCATGCTTC TACCTCACGC 
TTACAACGTT TTTCGCATAA ATATGCGCTG GCCGTACTGA TGGCCAATGC CTGTGGCAGT 
AGCGCGCTGT GGGATGAAAG CGGGCAACTT ATTGTTCGTG CCGATTGCGG TTCGCTATTA 
CTGACGGGCC TGCGCACAAC GGAGGGTTGG CAAGGCGATA TCATTCCATT ACGCTAA
 
Protein sequence
MSSWKIAAAQ YAPLNASPAE HVAHHLEYIE LAARQQCELL VFPSLSLLGC DERNKSLPAP 
PDEALLQPLT HAADTHHMTI IVGMPVEHNC RFVKGIAIFA PWLTSPLMFH KSHGACIARQ 
RSAINVVDEQ PEGGDIDPSF TLFTTSQCLN EPELHASTSR LQRFSHKYAL AVLMANACGS 
SALWDESGQL IVRADCGSLL LTGLRTTEGW QGDIIPLR