Gene SeD_A1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1319 
Symbol 
ID6874486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1296354 
End bp1296704 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID642784487 
Producttranscriptional activator FlhD 
Protein accessionYP_002215157 
Protein GI198243000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0102407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones3 
Fosmid unclonability p-value1.2450300000000001e-24 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACAA TGCATACATC CGAGTTGCTA AAACACATTT ATGACATCAA TTTGTCATAT 
TTACTCCTTG CACAGCGTTT GATCGTCCAG GACAAAGCAT CTGCGATGTT CCGCCTCGGT 
ATCAACGAAG AGATGGCAAA CACACTGGGC GCGTTGACCC TGCCGCAGAT GGTCAAACTG 
GCGGAGACGA ACCAGTTAGT TTGTCATTTC CGGTTTGACG ATCATCAGAC GATCACCCGT 
TTGACTCAGG ATTCGCGCGT CGATGATTTA CAGCAGATTC ACACAGGTAT CATGCTTTCA 
ACGCGTTTGC TCAATGAAGT GGACGATACG GCGCGTAAGA AAAGGGCATG A
 
Protein sequence
MGTMHTSELL KHIYDINLSY LLLAQRLIVQ DKASAMFRLG INEEMANTLG ALTLPQMVKL 
AETNQLVCHF RFDDHQTITR LTQDSRVDDL QQIHTGIMLS TRLLNEVDDT ARKKRA