| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1287 |
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| Symbol | fliA |
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| ID | 6871318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1272983 |
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| End bp | 1273672 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642784458 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_002215131 |
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| Protein GI | 198242943 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.867666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.000600244 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAAAC ACTCGCTGTG GCAGCGTTAT GTACCGCTGG TGCGTCACGA AGCATTGCGC
CTGCAGGTGC GATTGCCGGC GAGCGTGGAA CTGGACGATC TGCTACAAGC GGGCGGCATC
GGGTTATTAA ATGCGGTCGA CCGATATGAC GCTTTGCAAG GAACGGCATT TACCACTTAC
GCAGTGCAGC GTATTCGTGG GGCGATGCTG GATGAATTAC GCAGCCGCGA TTGGGTGCCG
CGTAGCGTCC GGCGTAATGC CCGCGAAGTG GCGCAGGCGA TGGGACAACT GGAGCAGGAA
CTGGGGCGTA ATGCGACGGA AACCGAAGTG GCGGAACGTC TTGGCATCCC TGTTGCGGAG
TATCGTCAGA TGTTGCTCGA TACCAACAAC AGCCAACTTT TCTCTTACGA TGAGTGGCGG
GAAGAGCATG GCGATAGCAT CGAACTGGTG ACTGAAGAAC ATCAACAGGA AAACCCGTTA
CATCAACTGC TGGAGGGCGA CCTGCGACAG CGGGTAATGG ATGCGATTGA ATCGCTGCCG
GAACGCGAGC AACTGGTGTT AACGCTGTAT TACCAGGAAG AGCTCAACCT CAAAGAGATT
GGCGCGGTAC TGGAAGTCGG CGAATCGCGG GTCAGCCAGT TGCATAGTCA GGCCATCAAA
CGATTACGCA CCAAACTGGG TAAGTTATAG
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| Protein sequence | MDKHSLWQRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLNAVDRYD ALQGTAFTTY
AVQRIRGAML DELRSRDWVP RSVRRNAREV AQAMGQLEQE LGRNATETEV AERLGIPVAE
YRQMLLDTNN SQLFSYDEWR EEHGDSIELV TEEHQQENPL HQLLEGDLRQ RVMDAIESLP
EREQLVLTLY YQEELNLKEI GAVLEVGESR VSQLHSQAIK RLRTKLGKL
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