Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1209 |
Symbol | |
ID | 6872451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1201430 |
End bp | 1202533 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642784388 |
Product | putative oxidoreductase YjhC |
Protein accession | YP_002215061 |
Protein GI | 198245130 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.016444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.354705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAT ACGGTGTTGT AGGTACAGGT TATTTTGGCG CTGAACTGGC GCGATTTATG TCTAAGGTTG AAGGGGCGAA AATCACTGCG ATTTACGATC CGGTAAATGC GGCTCCGATA GCGAAAGAGT TGAACTGTGT CGCCACTGCA ACGATGGAGG CGCTTTGTTC CCATCCTGAT GTGGATTGCG TAATTATTGC TTCACCAAAT TACTTACATA AAGCGCCAGT CATTGCGGCG GCTAAAGCGG GTAAACACGT GTTTTGTGAA AAACCTATCG CCTTAAATTA CCAGGATTGT AAGGATATGG TTGATGCCTG CAAAGAAGCT GGTGTTACCT TTATGGCGGG TCACGTTATG AACTTTTTTC ACGGGGTTCG CCACGCTAAA GCGCTCATCA AAGCTGGTGA AATTGGTGAA GTTACACAAG TTCACACTAA ACGTAATGGT TTTGAAGACG TGCAGGATGA GATCTCATGG AAGAAGATTC GCGCAAAGTC AGGTGGGCAT CTGTACCATC ACATTCACGA GCTAGATTGT ACACTGTTCA TCATGGATGA AACCCCATCC CTGGTTTCAA TGGCGGCGGG GAATGTTGCG CACAAAGGTG AAAAATTTGG TGATGAAGAT GATGTTGTCC TAATCACCCT TGAGTTTGAA AGCGGTCGTT TCGCGACACT TCAGTGGGGA TCATCGTTCC ACTACCCTGA GCACTATGTA TTAATTGAGG GCACGACAGG TGCAATTCTC ATTGATATGC AAAACACGGC TGGTTATCTA ATAAAAGCGG GCAAAAAAAC ACACTTTCTT GTGCATGAAA GCCAGGCGGA GGATGATGAT CGTCGCAACG GTAACATATC CAGCGAGATG GATGGCGCAA TCGCTTATGG TAAACCCGGT AAACGTACGC CGATGTGGCT CTCATCAATT ATGAAACTGG AGATGCAGTA CTTGCATGAT GTGATAAACG GTCTGGAGCC AAGCGAGGAG TTTGCTAAAT TGCTAACGGG AGAAGCGGCG ACAAATGCTA TTGCTACCGC TGATGCTGCG ACGCTTTCCT CAAACGAGGG GCGCAAAGTT AAACTCACTG AAATTCTTGG CTAA
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Protein sequence | MTKYGVVGTG YFGAELARFM SKVEGAKITA IYDPVNAAPI AKELNCVATA TMEALCSHPD VDCVIIASPN YLHKAPVIAA AKAGKHVFCE KPIALNYQDC KDMVDACKEA GVTFMAGHVM NFFHGVRHAK ALIKAGEIGE VTQVHTKRNG FEDVQDEISW KKIRAKSGGH LYHHIHELDC TLFIMDETPS LVSMAAGNVA HKGEKFGDED DVVLITLEFE SGRFATLQWG SSFHYPEHYV LIEGTTGAIL IDMQNTAGYL IKAGKKTHFL VHESQAEDDD RRNGNISSEM DGAIAYGKPG KRTPMWLSSI MKLEMQYLHD VINGLEPSEE FAKLLTGEAA TNAIATADAA TLSSNEGRKV KLTEILG
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