Gene SeD_A1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1135 
Symbol 
ID6871500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1127155 
End bp1128264 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content55% 
IMG OID642784319 
ProductMOSC domain-containing protein 
Protein accessionYP_002214993 
Protein GI198245155 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0633] Ferredoxin
[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00343917 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACGT TATCACGGCT CTTTATTCAT CCGGTCAAAT CCATGCGCGG CATTGGCCTG 
ACTCATGCGC TGGCAGATAT CAGCGGCCTG GCTTTTGATC GCATCTTCAT GGTGACCGAG
CCTGACGGCA CATTTATTAC CGCCCGCCAG TTTCCACAAA TGGTACGTTT TACCCCTTCT
CCCTTACACG ACGGCCTCCA TTTGACCGCG CCAGACGGCA GTAGCGCGCT GGTTCGCTTT
ACGGATTTCA CCCCGCAGGA TGCGCCGACC GAGGTCTGGG GAAACCATTT TACCGCTCGC
GTCGCCCCGA CGGCGATTAA TCAATGGTTG AGCGGCTTTT TCTCCCGCGA TGTCCAGTTG
CGCTGGGTTG GGCCGCAGTT GACGCGCCGG GTCAAACGAC ATAACGCGGT GCCGCTGGGA
TTTGCCGATG GCTACCCGTA TTTATTGACC AACGAAGCCT CGCTGCGCGA TCTGCAACAG
CGTTGTCCGG CAGGCGTACA AATGGAACAA TTTCGCCCAA ACTTAGTGGT TTCCGGCGTA
GCGGCCTGGG AGGAAGATAG CTGGAAAGTG CTTCGCATTG GCGATGTGAT TTTTGACGTC
GTGAAGCCCT GTAGCCGCTG TATTTTTACA ACCGTCAGCC CTGAAAAGGG GCAAAAACAT
CCTTCCGGAG AACCGCTGGC GACACTGCAA GCTTTTCGTA CCGCCCAGGA CAATGGCGAT
GTGGATTTCG GTCAGAATCT GATTGCCCGC AATAGCGGCG TCGTTCGCGT CGGCGATGAA
GTGGAGATTC TGGCGACAGC TCCGGCAAAA GCTTATGGCG CCACAACGGT CGACGACAGC
GTTACGCCAG ATAAACACCC GGACGCGAGT GTAACCATCG ACTGGCAGGG GCAAACCTTC
TGCGGGAATA ATCAACAGGT ACTACTGGAA CAGTTGGAGA ATCAGGGGAT TCGTATTCCG
TATTCTTGCC GGGCTGGTAT CTGTGGTTGC TGCCGGATAC GTTTGCTGGA AGGCGAAGTA
AGTCCGCTGA AAAAATCGGC TATGGGTGAC GATGGTACGA TTCTGAGCTG TAGCTGCGTG
CCTAAGACCG CGTTACGACT GGAGAATTAA
 
Protein sequence
MATLSRLFIH PVKSMRGIGL THALADISGL AFDRIFMVTE PDGTFITARQ FPQMVRFTPS 
PLHDGLHLTA PDGSSALVRF TDFTPQDAPT EVWGNHFTAR VAPTAINQWL SGFFSRDVQL
RWVGPQLTRR VKRHNAVPLG FADGYPYLLT NEASLRDLQQ RCPAGVQMEQ FRPNLVVSGV
AAWEEDSWKV LRIGDVIFDV VKPCSRCIFT TVSPEKGQKH PSGEPLATLQ AFRTAQDNGD
VDFGQNLIAR NSGVVRVGDE VEILATAPAK AYGATTVDDS VTPDKHPDAS VTIDWQGQTF
CGNNQQVLLE QLENQGIRIP YSCRAGICGC CRIRLLEGEV SPLKKSAMGD DGTILSCSCV
PKTALRLEN