Gene SeD_A0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0943 
Symbol 
ID6872256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp934579 
End bp935388 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID642784132 
Productsugar phosphatase SupH 
Protein accessionYP_002214807 
Protein GI198243894 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTA ACGTTGTCGT TACAGATATG GACGGCACTT TTCTCGACGA TGCCAAGCAG 
TACGATCGTG TACGCTTCAT GGCGCAATAC CAGGAACTGA AAAAACGTAA TATCGAATTT
GTGGTCGCCA GCGGTAATCA GTACTACCAG TTGATCTCCT TCTTCCCCGA GCTGAAAGAC
GAAATTTCCT TTGTCGCAGA AAATGGCGCG CTGGTGTATG AACATGGCAA GCAGTTGTTT
CACGGGGAGC TAACCCGGCA TGAATCGCGG ATTGTGATTG GCGAACTGCT GAAGGATAAG
CAGCTTAACT TCGTCGCCTG CGGTCTGAAA AGCGCTTATG TCAGCAAAAA CGCTCCCGAG
ACTTTCGTGG CGCTGATGGC CAAACATTAT CACCGCCTGC AGCCGGTAAA CGATTATCAC
GACATTGACG ATATCCTGTT TAAGTTCTCC CTGAATTTGC CCGATGAACA AATTCCGCTG
GTTATCGACA AACTGCACGT ATCTCTGGAT GGCATCATGA AGCCCGTCAC CAGCGGCTTC
GGTTTTATCG ACCTGATTAT CCCGGGACTG CATAAAGCGA ATGGCATCAG TCGTCTGTTA
AAGCGCTGGA ACAGGTCGCC ACAGAATGTC GTCGCCATTG GCGACAGCGG TAATGATGCG
GAAATGTTGA AAATGGCGCA TTACTCTTTT GCCATGGGCA ATGCCGCAGA CAATATCAAA
GCGCTTTCAC GTTATCACAC TGATGATAAT AACCATCAAG GCGCGCTCAA CGTCATTCAG
GCCGTGCTTG ACGGCACCGA TCCCTTCTGA
 
Protein sequence
MTVNVVVTDM DGTFLDDAKQ YDRVRFMAQY QELKKRNIEF VVASGNQYYQ LISFFPELKD 
EISFVAENGA LVYEHGKQLF HGELTRHESR IVIGELLKDK QLNFVACGLK SAYVSKNAPE
TFVALMAKHY HRLQPVNDYH DIDDILFKFS LNLPDEQIPL VIDKLHVSLD GIMKPVTSGF
GFIDLIIPGL HKANGISRLL KRWNRSPQNV VAIGDSGNDA EMLKMAHYSF AMGNAADNIK
ALSRYHTDDN NHQGALNVIQ AVLDGTDPF