Gene SeD_A0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0884 
SymbolhutC 
ID6873112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp878228 
End bp878953 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content57% 
IMG OID642784079 
Producthistidine utilization repressor 
Protein accessionYP_002214754 
Protein GI198243749 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCAT CCCGCTCCCG TTCTGCACCT GCGCCTTTTT ACGAAACGGT GAAACAGGAC 
ATCTGTAAAA AAATAGCCGG CGGCGTCTGG CAGCCGCACG ATCGCATTCC GTCGGAAGCT
GAACTGGTCG CTCAGTATGG CTTTAGCCGA ATGACCATCA ACCGGGCGCT GCGTGAGCTG
ACGGATGAAG GGTGGCTGGT GCGTTTACAG GGCGTGGGGA CGTTTGTCGC CGAACCGAAA
GGCCAGTCCG CGCTGTTTGA AGTCCGCAGT ATCGCCGAGG AGATTGCCGC CCGCCGTCAT
CAGCATCGTT GTGAGGTGCT CACGCTGGAG CGCGTGCGGG CAAACGCCAT CCAGGCCAGC
GCTCTCAACG TCAATGAGAG CGATGTCATT TTCCATTCCA TCATGGTGCA TTATGAAAAC
GATCTGCCGG TACAAATTGA AGATCGCTGC GTGAATGCGG ATATTGCCGT GGATTACCTG
ACGCAGGATT ACCGTCAGAC CACGCCGCAC GCTTATTTGT CGCGGATCGC GCCGCTAACG
GAAGGGGAAC ATATTGTGGA GGCGGTGCGC GCCACGGCGC AGGAGTGCGC GTGGTTAACT
ATCAAAGAGC ATGAGCCTTG TCTGCTCATT CGTCGTACAA CCTGGTCCGC GTCGCGGATT
GTTTCTCACG CCCGCTTACT TTTCCCCGGG TCGCGCTATC GGCTACAGGG ACGATTTATC
TCCTGA
 
Protein sequence
MYSSRSRSAP APFYETVKQD ICKKIAGGVW QPHDRIPSEA ELVAQYGFSR MTINRALREL 
TDEGWLVRLQ GVGTFVAEPK GQSALFEVRS IAEEIAARRH QHRCEVLTLE RVRANAIQAS
ALNVNESDVI FHSIMVHYEN DLPVQIEDRC VNADIAVDYL TQDYRQTTPH AYLSRIAPLT
EGEHIVEAVR ATAQECAWLT IKEHEPCLLI RRTTWSASRI VSHARLLFPG SRYRLQGRFI
S