Gene SeD_A0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0572 
Symbol 
ID6872109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp588811 
End bp590109 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content51% 
IMG OID642783792 
Productputative purine permease YbbY 
Protein accessionYP_002214479 
Protein GI198242175 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCTG TTATTAACCG CGAAAGTGTG TTGTCCGGCT TTCAGTGGTT TTTCTTTATT 
TTCTGTAACA CGGTTGTGGT TCCCCCTACC TTGCTGTCCG CTTTTCATCT TCCCGCTGAT 
AACTTGTTAA TGCTCACACA ATACGCTTTT TTGACCACCG CGTTGGCCTG CCTGGTTCAG 
GCATTTTGCG GCCATCGCCG TGCCATTATG GAAGGGCCGA CAGGACTGTG GTGGGGCGCT 
ATTCTTACGA TTACGCTTGG CGAGGCGTCT CGCGGCACGC CGCTGAACGA TATCGCCTCC 
AGCCTGTCGG TCGGGATCGC GATCTCCGCA ATGGTGACGA TATTTATCGG CATTAGCGGC 
TTAGGACACC GTCTGGCTCG CCTGTTTACG CCGGCGGTAA TGGTTTTTTT CATGCTGCTT 
TTGGGCGCGC AGCTGACCTC AATATTTTTT AAAGGCATGC TGGGGCTGCC TTTTGGCATT 
GCCGATACCA GCGCCAGAAT CAAATTGGCC CCCTTTGGGC TGGCGGTCGC GGTGATGTGT 
TTTATCCTCG CGATGATTAT TTTCCTGCAG CAGCGTATCT CCCGTTACGC GTTACTGGTA 
GGGACCGTGG TCGGGTGGGG GCTATGGCGG TTATGCTTTC CTTCATCACA CTTACCGCCG 
GGTGAATTAA GCTGGCGATG GTTTCCGCTG GGCAGCCACG GCACGCTGAT GCCGGGTATT 
ATTGTGACGG CGGTGATGAC GGGGTTAGTC AACATCAGCA ACACTTACGG CGCCATCCGC 
GGTACCGATA TCTTTTATCT GCATCAAGGG TCGGGCAGTT CTCGTTATCG CCGAAGCTTT 
ATGATTTCCG GACTGATGAC GTTAGTGACG GTGCCTTTCG CGGTCGTGCC TTTTTCGCCT 
TTTGTGTCTT CCATTGGTTT ATTAACGCAA ACCGGCGACA GTTCTCGCAA ATCCTTTATC 
TGTGGTAGCG CGCTGTGTCT GCTGGTTGCC ATTATAACGC CGTTAACCCG CTTATTTTGC 
GCTATTCCAC TGGCGATCAG CAGCGCCGTT ATGCTGGTCT CTTATTTACC TTTACTTTAT 
TCCGGTTTGG TTTTTAGCCA GCAAATTACG TTTACCGCGC GGAATATTTA TCGCCTGGCG 
TTACCGCTTT TTGTCGGCAT TTTTTTGATG GGGCTTCCTC CGGTCTATTT ACAGGATCTT 
CCACTGATGA TTCGTCCTCT GCTTAGCAAC GGATTACTGG TGGGAATCTT ACTGGCAGTG 
CTTATGGAAA ATCTTATTCC GTGGGAACGC ATTAAATAA
 
Protein sequence
MFPVINRESV LSGFQWFFFI FCNTVVVPPT LLSAFHLPAD NLLMLTQYAF LTTALACLVQ 
AFCGHRRAIM EGPTGLWWGA ILTITLGEAS RGTPLNDIAS SLSVGIAISA MVTIFIGISG 
LGHRLARLFT PAVMVFFMLL LGAQLTSIFF KGMLGLPFGI ADTSARIKLA PFGLAVAVMC 
FILAMIIFLQ QRISRYALLV GTVVGWGLWR LCFPSSHLPP GELSWRWFPL GSHGTLMPGI 
IVTAVMTGLV NISNTYGAIR GTDIFYLHQG SGSSRYRRSF MISGLMTLVT VPFAVVPFSP 
FVSSIGLLTQ TGDSSRKSFI CGSALCLLVA IITPLTRLFC AIPLAISSAV MLVSYLPLLY 
SGLVFSQQIT FTARNIYRLA LPLFVGIFLM GLPPVYLQDL PLMIRPLLSN GLLVGILLAV 
LMENLIPWER IK