Gene SeD_A0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0561 
Symbol 
ID6871502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp576421 
End bp577080 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content54% 
IMG OID642783781 
ProductABC transporter integral membrane protein 
Protein accessionYP_002214468 
Protein GI198244784 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGATT TATTGCCGGA TTTAACGCTG GCGTTCAATG AAACTTTCCA GATGTTGAGT 
ATTTCAACGG TGCTGGCGAT TCTTGGCGGT CTACCGCTCG GTTTTCTGAT TTTTGTCACC
GATCGTCATC TGTTCTGGCA GAACCGTTTT ATTTATCTCG TCGCCTCGGT TCTGGTGAAT
ATTATCCGCT CGGTGCCATT TGTTATTTTA CTGGTGCTGT TACTGCCGCT AACGCAGCTT
TTGCTGGGCA ATACGATTGG CCCGATTGCA GCCTCCGTCC CGCTGTCGGT GGCCGCAATC
GCGTTTTATG CACGCCTGGT AGATAGCGCG CTCCGTGAAG TCGATAAAGG GATTATTGAG
GCGGCGCTGG CATTCGGCGC TAGTCCGATG CGTATTATCT GTACCGTACT GTTGCCGGAA
GCCAGCGCAG GGCTGCTGCG CGGCCTGACG ATTACGCTGG TAAGCTTAAT CGGCTACTCG
GCGATGGCCG GGATTGTCGG CGGCGGCGGG GTAGGCGACC TGGCGATTCG CTATGGCTAC
TACCGTTACG AAACCGAAGT GATGGTTGTT ACCGTAGTGG CGCTGATTGT GCTGGTTCAG
GTCGTTCAGA TGCTGGGCGA CTGGCTGGCA AAACGTGCCG ACAAGCGCGA CAGACACTAA
 
Protein sequence
MDDLLPDLTL AFNETFQMLS ISTVLAILGG LPLGFLIFVT DRHLFWQNRF IYLVASVLVN 
IIRSVPFVIL LVLLLPLTQL LLGNTIGPIA ASVPLSVAAI AFYARLVDSA LREVDKGIIE
AALAFGASPM RIICTVLLPE ASAGLLRGLT ITLVSLIGYS AMAGIVGGGG VGDLAIRYGY
YRYETEVMVV TVVALIVLVQ VVQMLGDWLA KRADKRDRH