Gene SeD_A0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0560 
Symbol 
ID6872206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp575412 
End bp576428 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content56% 
IMG OID642783780 
Productmethionine import ATP-binding protein MetN 2 
Protein accessionYP_002214467 
Protein GI198242263 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA TAGAAAAAGT CTGCGTCGAT TTTACCGCCG GTCGCGGTAC CCCCACGCGC 
GCGGTGGATG ATGTGAGCCT GCATATCGCC GCGGGCGAGA TTTTTGGCAT TGTCGGTACC
AGCGGCGCAG GAAAAAGCAC TCTGCTGCGT ACCCTGAACG CCTTAACGCG TCCCAGCCAG
GGGCGCGTCA ACGTCAACGG CGTGGAAATT TCGGCGCTGG ACGGAAAAGC GTTACGCCAG
GCGCGGCAGC GTATTGGTAT GATTTTCCAG CATTTTAACT TAATGCATAC CCGGACAGTG
GCGCAAAACG TTGCGTTTAG CCTGAAAGCG GCTGGCTGGG AACGCAGCAA AATCGCGCCA
CGGGTGGCGG AAATTTTAAC GCTGGTGGGC CTTGCCGATA AAGCGAACCG TTTTCCGGTA
CAGCTCAGCG GCGGGCAAAA ACAGCGGGTG GGGATAGCGC GCGCCATCGC TAACCATCCG
GATGTGTTGT TGTGTGACGA ACCAACTTCC GCTCTGGATC TGGAAACTTC CGCCACGATT
CTGGCTCTGC TCAGACAGAT CAACGCACAG CTCGGGATTA CTATTGTGCT GATCACCCAT
GAAATGAACG TGATCAAATC TATTTGCGAT CGCGTGGCGG TGATGTCGGG CGGTAAGGTT
GTGGAATCGG GCGAGGTGTT TGATGTGTTT GCCCACCCGC AACACGCTTT CACACAGCAA
CTGGTGTCTC ATACCCTTAA TTTGACCCTG CCGGAACGTT TACGGGAACA CCTGCCCGGG
CAGTTGCTGA AAATTTTGTT TATCGGCGAT TCGGCGGAGC AGCCGGTACT GTCGGAGGTG
GCGATCAAGT TTGGCGTCGC GGTCAATATC CTGCATGGCA AGATTGAATA TATCGGCGAA
CGCGCGTTGG GCATTCTGGT GGTGCAATTA ACCGCGCCGC ATAATCCAAC GGCGGTGGCC
GCCGCCGTGG AGCATATCCG TCAACGTACC GCACAGGTGG AGGTGATCCG TGGATGA
 
Protein sequence
MIEIEKVCVD FTAGRGTPTR AVDDVSLHIA AGEIFGIVGT SGAGKSTLLR TLNALTRPSQ 
GRVNVNGVEI SALDGKALRQ ARQRIGMIFQ HFNLMHTRTV AQNVAFSLKA AGWERSKIAP
RVAEILTLVG LADKANRFPV QLSGGQKQRV GIARAIANHP DVLLCDEPTS ALDLETSATI
LALLRQINAQ LGITIVLITH EMNVIKSICD RVAVMSGGKV VESGEVFDVF AHPQHAFTQQ
LVSHTLNLTL PERLREHLPG QLLKILFIGD SAEQPVLSEV AIKFGVAVNI LHGKIEYIGE
RALGILVVQL TAPHNPTAVA AAVEHIRQRT AQVEVIRG