Gene SeD_A0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0546 
Symbol 
ID6874518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp560397 
End bp561224 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content43% 
IMG OID642783766 
Producthypothetical protein 
Protein accessionYP_002214453 
Protein GI198244471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.404323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGAA AAGCAGTTAC GCTTCTTTTC CTGCTTTCTC CCGCCGTCAG TTATGCAGGG 
TTATTTGATT CCACTCCAGA GTTAAAATGT GGCAACGATA ATGCAGTCAC GGCGGCAAAA 
GAATGGATTT ACAATGAAGC ATTAGGTCGT TTACAGCAAG ACTATATTAA AGAGCCCACC 
ACGCTTTTCT TCGATATCCC CCAGACTCAA TACGAGCAGC AACTCCGGGC TATTCCTGTT 
CAATTCAGTG ATGTAATCAC GCAGAACCCT CAAGCAGAAA ATGCCAACTT ACGAACTTGC 
TCGGCTACCA TCGCCATGGG TATTCCTCAG CCATTATTTA AATTAATGAA AGACTTACCA 
AATACTCTAT TCTATATTTC ACAAGGGGAT GGACAGGTAA TAAACAATAC GGTGACCTGG 
AAACAGGTTA ACTACAATAT TCAGCTAGCA GACAACAACA AAGATATTGT TGTCACCCCT 
GTGCAAAAAA CCGATAAATT GGCGCGGTCT ATTTATGTAA TGGCAAGAAT GACGGTATCT 
GGTGATAGCA TTATAAAGAA AAAAAATAAC TCACTGATTG AAATCGCAGC AAAGAAATTT 
GAGAGTAGAG ATCGCGAGCT TAATCAGGTC TGGAAATCGC TACCCGCCTC TGCCCGAACG 
GCATTAAAAC AAGAGCAGCG AGTCTGGGTG ACCAAAAAAG AGCAGCAGTG CGGCAAACTT 
AGCGATGCAA AATCCGAGGC CATACCTGCT GAGAAGCGCA TCAGTATTTA TAAATGCCAG 
CTTGAAATGA CCATCGCCAG AACGGCCTAT CTCGACGGTA GCGAATAA
 
Protein sequence
MFRKAVTLLF LLSPAVSYAG LFDSTPELKC GNDNAVTAAK EWIYNEALGR LQQDYIKEPT 
TLFFDIPQTQ YEQQLRAIPV QFSDVITQNP QAENANLRTC SATIAMGIPQ PLFKLMKDLP 
NTLFYISQGD GQVINNTVTW KQVNYNIQLA DNNKDIVVTP VQKTDKLARS IYVMARMTVS 
GDSIIKKKNN SLIEIAAKKF ESRDRELNQV WKSLPASART ALKQEQRVWV TKKEQQCGKL 
SDAKSEAIPA EKRISIYKCQ LEMTIARTAY LDGSE