Gene SeD_A0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0541 
Symbolfsr 
ID6872374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp555674 
End bp556894 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content55% 
IMG OID642783762 
Productfosmidomycin resistance protein 
Protein accessionYP_002214449 
Protein GI198242479 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.404971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA GTGAACCAAC CCAGCCGTTA GCCGGCGCGC CCGCAGCGGC CGCTAAAGCA 
CGTACTTCGT TTGGTATTTT GGGCGCGATC AGTCTTTCCC ATCTGCTGAA CGATATGATC
CAGTCGCTAA TCTTAGCCAT TTATCCCCTG TTGCAGGCGG AGTTTTCGCT GACTTTCGTC
CAGATAGGTT TGATCACCCT GACGTTCCAG CTCGCCTCAT CGCTGCTGCA ACCGGTCGTC
GGCTACTGGA CGGATAAGTA TCCCATGCCG TGGTCGCTGC CTATCGGCAT GTGTTTTACC
CTGAGCGGGC TGGTACTGCT GGCAATGGCG GGAAGTTTTG GCGGCGTATT GCTCGCTGCG
GCGCTGGTGG GTACCGGCTC GTCCGTTTTT CACCCGGAAT CGTCCCGCGT GGCGCGCATG
GCCTCCGGCG GACGTCATGG TCTGGCGCAG TCTATCTTCC AGGTCGGCGG TAACTTCGGC
AGTTCGTTGG GTCCGCTGCT GGCCGCCGTG ATTATCGCGC CCTATGGCAA AGGGAATGTC
GCCTGGTTTG TGCTGGCCGC GCTGCTGGCG ATCGTGGTGC TGGCGCAGAT CAGCCGCTGG
TATGCAGCCC AGCACCGGAT AGCGAAAGGC AAGCCAAAAG CGATAATCGC TAACCCGCTG
CCGCGCAATA AAGTCGTGCT GGCGGTCAGC GTATTATTGC TACTCATTTT CTCGAAATAT
TTCTATATGG CGAGCATCAG TAGCTATTAC ACCTTTTATC TGATGCAAAA ATTCGGATTA
TCAATACAAA ACGCGCAGCT CCATCTGTTT GCCTTCCTGT TTGCGGTGGC TGCCGGGACG
GTTATCGGCG GGCCGGTGGG CGACAAAATC GGCAGGAAAT ATGTGATTTG GGGCTCTATT
CTCGGTGTCG CGCCGTTTAC CCTTGTTTTA CCCTACGCCA CGCTGTACTG GACGGGGATT
TTAACGGTGA TTATCGGCTT TATTCTCGCG TCGGCGTTTT CCGCCATTCT GGTGTATGCC
CAGGAGTTGC TGCCAGGACG CATCGGTATG GTTTCCGGCC TGTTTTTCGG GTTTGCCTTC
GGGATGGGAG GCCTGGGCGC AGCGGTGCTG GGGCTGATTG CCGACCATAC CAGTATCTAT
TTAGTTTATA AAATCTGTGC TTTCCTGCCG CTTCTGGGGA TACTGACCAT ATTCTTACCT
GATAATCGAC ATAAATCGTG A
 
Protein sequence
MAMSEPTQPL AGAPAAAAKA RTSFGILGAI SLSHLLNDMI QSLILAIYPL LQAEFSLTFV 
QIGLITLTFQ LASSLLQPVV GYWTDKYPMP WSLPIGMCFT LSGLVLLAMA GSFGGVLLAA
ALVGTGSSVF HPESSRVARM ASGGRHGLAQ SIFQVGGNFG SSLGPLLAAV IIAPYGKGNV
AWFVLAALLA IVVLAQISRW YAAQHRIAKG KPKAIIANPL PRNKVVLAVS VLLLLIFSKY
FYMASISSYY TFYLMQKFGL SIQNAQLHLF AFLFAVAAGT VIGGPVGDKI GRKYVIWGSI
LGVAPFTLVL PYATLYWTGI LTVIIGFILA SAFSAILVYA QELLPGRIGM VSGLFFGFAF
GMGGLGAAVL GLIADHTSIY LVYKICAFLP LLGILTIFLP DNRHKS