Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0541 |
Symbol | fsr |
ID | 6872374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 555674 |
End bp | 556894 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642783762 |
Product | fosmidomycin resistance protein |
Protein accession | YP_002214449 |
Protein GI | 198242479 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.404971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGA GTGAACCAAC CCAGCCGTTA GCCGGCGCGC CCGCAGCGGC CGCTAAAGCA CGTACTTCGT TTGGTATTTT GGGCGCGATC AGTCTTTCCC ATCTGCTGAA CGATATGATC CAGTCGCTAA TCTTAGCCAT TTATCCCCTG TTGCAGGCGG AGTTTTCGCT GACTTTCGTC CAGATAGGTT TGATCACCCT GACGTTCCAG CTCGCCTCAT CGCTGCTGCA ACCGGTCGTC GGCTACTGGA CGGATAAGTA TCCCATGCCG TGGTCGCTGC CTATCGGCAT GTGTTTTACC CTGAGCGGGC TGGTACTGCT GGCAATGGCG GGAAGTTTTG GCGGCGTATT GCTCGCTGCG GCGCTGGTGG GTACCGGCTC GTCCGTTTTT CACCCGGAAT CGTCCCGCGT GGCGCGCATG GCCTCCGGCG GACGTCATGG TCTGGCGCAG TCTATCTTCC AGGTCGGCGG TAACTTCGGC AGTTCGTTGG GTCCGCTGCT GGCCGCCGTG ATTATCGCGC CCTATGGCAA AGGGAATGTC GCCTGGTTTG TGCTGGCCGC GCTGCTGGCG ATCGTGGTGC TGGCGCAGAT CAGCCGCTGG TATGCAGCCC AGCACCGGAT AGCGAAAGGC AAGCCAAAAG CGATAATCGC TAACCCGCTG CCGCGCAATA AAGTCGTGCT GGCGGTCAGC GTATTATTGC TACTCATTTT CTCGAAATAT TTCTATATGG CGAGCATCAG TAGCTATTAC ACCTTTTATC TGATGCAAAA ATTCGGATTA TCAATACAAA ACGCGCAGCT CCATCTGTTT GCCTTCCTGT TTGCGGTGGC TGCCGGGACG GTTATCGGCG GGCCGGTGGG CGACAAAATC GGCAGGAAAT ATGTGATTTG GGGCTCTATT CTCGGTGTCG CGCCGTTTAC CCTTGTTTTA CCCTACGCCA CGCTGTACTG GACGGGGATT TTAACGGTGA TTATCGGCTT TATTCTCGCG TCGGCGTTTT CCGCCATTCT GGTGTATGCC CAGGAGTTGC TGCCAGGACG CATCGGTATG GTTTCCGGCC TGTTTTTCGG GTTTGCCTTC GGGATGGGAG GCCTGGGCGC AGCGGTGCTG GGGCTGATTG CCGACCATAC CAGTATCTAT TTAGTTTATA AAATCTGTGC TTTCCTGCCG CTTCTGGGGA TACTGACCAT ATTCTTACCT GATAATCGAC ATAAATCGTG A
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Protein sequence | MAMSEPTQPL AGAPAAAAKA RTSFGILGAI SLSHLLNDMI QSLILAIYPL LQAEFSLTFV QIGLITLTFQ LASSLLQPVV GYWTDKYPMP WSLPIGMCFT LSGLVLLAMA GSFGGVLLAA ALVGTGSSVF HPESSRVARM ASGGRHGLAQ SIFQVGGNFG SSLGPLLAAV IIAPYGKGNV AWFVLAALLA IVVLAQISRW YAAQHRIAKG KPKAIIANPL PRNKVVLAVS VLLLLIFSKY FYMASISSYY TFYLMQKFGL SIQNAQLHLF AFLFAVAAGT VIGGPVGDKI GRKYVIWGSI LGVAPFTLVL PYATLYWTGI LTVIIGFILA SAFSAILVYA QELLPGRIGM VSGLFFGFAF GMGGLGAAVL GLIADHTSIY LVYKICAFLP LLGILTIFLP DNRHKS
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