| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0346 |
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| Symbol | pepD |
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| ID | 6871075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 364543 |
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| End bp | 366000 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642783583 |
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| Product | aminoacyl-histidine dipeptidase |
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| Protein accession | YP_002214271 |
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| Protein GI | 198245847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0296229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTGAAC TGTCTCAGTT ATCACCACAA CCTTTGTGGG ATATTTTTGC CAAAATCTGT
TCTATTCCTC ACCCGTCCTA TCACGAAGAG CAACTCGCGG AACATATTGT GAGTTGGGCC
AAAGAGAAAG GCCTTTACGT GGATCGCGAC CAGGTCGGTA ATATTCTGAT CCGTAAGCCC
GCCACTGCAG GTATGGAAAA TCGCAAGCCG GTCGTTTTAC AGGCGCATCT GGATATGGTG
CCGCAAAAAA ATAGCGACAC CGTTCACGAC TTCACTACAG ATCCTATCCA GCCTTATATT
GATGGCGAAT GGGTTAAAGC GCGCGGTACT ACGCTCGGCG CCGACAATGG TATTGGAATG
GCTTCTGCGT TAGCGGTACT GGCTGATGAT AATGTCGTCC ATGGCCCGCT GGAAGTGCTG
CTGACCATGA CCGAAGAAGC GGGCATGGAT GGCGCGTTCG GCCTCCAGTC CGGCTGGTTG
CAGGCCGACA TCCTGATCAA CACCGACTCT GAAGAAGAAG GTGAGATCTA TATGGGCTGC
GCAGGCGGTA TTGATTTTAC CTCTAATCTG CCGTTGACCC GTGAAGCTGT ACCCGCAGGA
TTTGCGTGCT TTAAGCTAAC CCTGAAAGGC CTGAAAGGCG GCCACTCCGG TGGTGAAATT
CACCTCGGTC TTGGCAATGC CAACAAATTG CTGGCGCGTT TTCTGGCCGG GCACGCAGAA
GAACTGGATC TGCGTCTGAT CGATTTCAAC GGCGGCACGC TGCGTAACGC GATTCCGCGC
GAAGCGTTCG CTACCCTCGC CGTTGCCGCA GACAACGTAG GCGCTCTGAA AACATTAGTG
AACGCTTACC AGGATATTCT GAAAAACGAA CTGGCGGAAA AAGAGAAAAA CCTGACGCTG
CAACTCAATG AGGTTGCCAG TGATAAAGCC GCATTGACCG CGCCGTCACG CGATACCTTT
GTGCGCCTGC TGAACGCAAC GCCGAACGGC GTGATCCGCA ATTCAGACGT GGCGAAAGGC
GTAGTGGAAA CATCGCTGAA CGTTGGCGTG GTCACAATGT CTGATGCGAA TGTCGAAATT
CACTGCCTGA TTCGCTCTCT TATCGACAGC GGTAAAGATT ATGTGGTGAG TATGCTGGAT
TCGCTGGGCA AGCTGGCTGG CGCGAAAACC GAAGCAAAAG GCAGCTATCC TGGCTGGCAG
CCCGATGCGA ACTCGCCGGT CATGCACCTG GTGCGGGAAA CCTATCAGCG TCTGTTTAAC
AAGACACCTA ACATCCAGAT TATCCACGCC GGCCTGGAAT GCGGTCTGTT TAAGAAACCC
TATCCGGATA TGGACATGGT TTCTATTGGG CCTACCATTA CCGGACCTCA CTCTCCGGAT
GAGCAGGTAC ATATCGAAAG CGTCGGCCAC TACTGGACTC TGCTGACCGA ATTGCTGAAA
GCGATTCCTG CGAAGTAA
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| Protein sequence | MSELSQLSPQ PLWDIFAKIC SIPHPSYHEE QLAEHIVSWA KEKGLYVDRD QVGNILIRKP
ATAGMENRKP VVLQAHLDMV PQKNSDTVHD FTTDPIQPYI DGEWVKARGT TLGADNGIGM
ASALAVLADD NVVHGPLEVL LTMTEEAGMD GAFGLQSGWL QADILINTDS EEEGEIYMGC
AGGIDFTSNL PLTREAVPAG FACFKLTLKG LKGGHSGGEI HLGLGNANKL LARFLAGHAE
ELDLRLIDFN GGTLRNAIPR EAFATLAVAA DNVGALKTLV NAYQDILKNE LAEKEKNLTL
QLNEVASDKA ALTAPSRDTF VRLLNATPNG VIRNSDVAKG VVETSLNVGV VTMSDANVEI
HCLIRSLIDS GKDYVVSMLD SLGKLAGAKT EAKGSYPGWQ PDANSPVMHL VRETYQRLFN
KTPNIQIIHA GLECGLFKKP YPDMDMVSIG PTITGPHSPD EQVHIESVGH YWTLLTELLK
AIPAK
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