Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0287 |
Symbol | dnaQ |
ID | 6871513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 304229 |
End bp | 304969 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642783531 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_002214220 |
Protein GI | 198244203 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.998111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA TGAGCACTGC AATTACACGA CAGATTGTCC TCGATACCGA AACCACCGGT ATGAACCAGA TAGGCGCGCA CTATGAAGGT CACAAGATTA TTGAGATCGG TGCGGTTGAG GTGATAAACC GTCGTCTGAC CGGCAACAAT TTTCATGTTT ACCTGAAGCC CGATCGCCTT GTCGATCCAG AGGCTTTTGG CGTACACGGT ATTGCCGATG AGTTTCTGCT GGATAAGCCG GTTTTTGCTG ATGTGGTCGA TGAGTTTCTT GATTATATCC GCGGCGCGGA GCTGGTCATC CATAACGCAT CGTTCGATAT CGGCTTTATG GATTATGAGT TTGGTCTGCT TAAACGCGAT ATTCCTAAAA CCAATACTTT CTGCAAAGTT ACCGATAGCC TGGCGTTGGC GCGGAAAATG TTCCCCGGCA AGCGTAACAG CCTTGATGCG CTGTGTTCGC GTTATGAGAT AGATAATAGC AAACGTACTT TGCACGGCGC ATTGCTCGAT GCCCAGATCC TTGCCGAAGT GTATCTGGCG ATGACGGGCG GACAAACGTC CATGACGTTT GCGATGGAGG GAGAGACGCA ACGGCAGCAA GGTGAAGCGA CCATTCAGCG AATCGTTCGC CAGGCCAGCC GGTTACGGGT CGTTTTTGCC TCTGAGGAAG AGCTGGCTGC GCATGAATCG CGACTTGATC TGGTGCAGAA AAAGGGCGGA AGTTGCCTTT GGCGGGCGTA A
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Protein sequence | MTDMSTAITR QIVLDTETTG MNQIGAHYEG HKIIEIGAVE VINRRLTGNN FHVYLKPDRL VDPEAFGVHG IADEFLLDKP VFADVVDEFL DYIRGAELVI HNASFDIGFM DYEFGLLKRD IPKTNTFCKV TDSLALARKM FPGKRNSLDA LCSRYEIDNS KRTLHGALLD AQILAEVYLA MTGGQTSMTF AMEGETQRQQ GEATIQRIVR QASRLRVVFA SEEELAAHES RLDLVQKKGG SCLWRA
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