Gene SeD_A0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0265 
Symbol 
ID6871769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp285130 
End bp285870 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID642783510 
Producthypothetical protein 
Protein accessionYP_002214204 
Protein GI198243314 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.485834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.889458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATCGGG TCCGCCCTGA ATATTTCGGC GAAATGAGCA GCTTTCAGTT TGAACAAATC 
GGCGTTATTC GCTCCCCCTA TAAAGAAAAA TTCGCCGTTC CGCGCCAGCC TGGTCTGGTC
AAAAGCGCCT GCGGCGAACT GCATCTGATA GCGCCTTACA ACCAGGCCGA TGCCGTTCGC
GGCCTGGAAG CTTTCAGCCA TTTGTGGGTG CTTTTCGTTT TTCATCAGAC GATGGACGGC
GGCTGGCGGC CGACAGTTCG TCCGCCCCGT CTTGGCGGTA ACGCCAGAAT GGGCGTTTTT
GCCACGCGCT CCACGTTCCG CCCCAATCCG ATTGGCATGT CGCTCGTTGC GCTAAAAGGT
ATCGAGTGCC GGAAAGAGAG CGTAATTCTG AAATTAGGCA GTCTGGATCT GGTGGATGGC
ACGCCGGTGG TGGATATTAA ACCGTATTTA CCGTTTGCCG AGGCCTTACC GGACGCCGCC
GCCAGCTATG CGCAACAGGC GCCGATAGCT GAAATGCCCG TGAGTTTTAC CGCTGAGGTG
GCTCAACAGC TTACGACGCT GGAAAGGCGT TATCCGCAGC TACGGACATT TATTTGCGAT
GTGCTGGCGC AAGATCCTCG CCCGGCTTAT CGTAAGGGTG AAGAGACGGG CAAAACCTAT
GCCGTCTGGC TGCATGATTT TAACGTGCGC TGGCGTGTGG TTAACACCGG ATTTGAAGTG
TTTGCGCTGG AACCACGGTA A
 
Protein sequence
MYRVRPEYFG EMSSFQFEQI GVIRSPYKEK FAVPRQPGLV KSACGELHLI APYNQADAVR 
GLEAFSHLWV LFVFHQTMDG GWRPTVRPPR LGGNARMGVF ATRSTFRPNP IGMSLVALKG
IECRKESVIL KLGSLDLVDG TPVVDIKPYL PFAEALPDAA ASYAQQAPIA EMPVSFTAEV
AQQLTTLERR YPQLRTFICD VLAQDPRPAY RKGEETGKTY AVWLHDFNVR WRVVNTGFEV
FALEPR