Gene SeD_A0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0180 
Symbol 
ID6871143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp191851 
End bp192645 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID642783427 
ProductS-adenosylmethionine decarboxylase 
Protein accessionYP_002214121 
Protein GI198246015 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAGC TGAAACTGCA TGGCTTTAAC AATCTGACGA AAAGCCTGAG TTTTTGTATT 
TACGATATCT GCTACGCCAA AACCGCAGAA GAGCGCGATG GCTATATCGC CTATATCGAT
GAACTCTATA ACGCCAACCG ACTGACCGAG ATCCTGTCGG AGACCTGCTC CATTATCGGC
GCGAACATCC TGAACATCGC CCGACAGGAT TATGAACCCC AGGGCGCCAG CGTCACGATT
CTGGTGAGCG AAGAGCCAGT CGACCCGAAA CTTATCGACC AAACCGAACA TCCCGGCCCG
CTGCCGGAAA CCGTGGTGGC GCACCTCGAT AAGAGCCATA TCTGTGTGCA TACCTATCCG
GAAAGCCATC CGGAAGGCGG GCTTTGCACC TTTCGCGCCG ACATCGAAGT GTCAACCTGC
GGGGTGATTT CACCGCTAAA AGCGCTCAAT TACCTGATCC ACCAGCTAGA GTCCGATATT
GTCACCATCG ATTACCGCGT GCGCGGCTTT ACGCGCGACG TCAACGGTAT GAAACACTTT
ATCGATCATG AGATTAATTC TATTCAGAAT TTTATGTCGG AAGATATGAA ATCGCTGTAT
GACATGGTGG ATGTAAACGT GTATCAGGAA AATATTTTCC ATACCAAGAT GCTGCTTAAA
GAGTTCGATC TTAAGCACTA CATGTTTCAC ACCAAACCGG AAGATCTCAC TGAAACCGAA
CGCCAGCAGA TCACCGCCGC GCTGTGGAAA GAGATGCGCG AGATTTACTA CGGCCGCAAT
ATTTCTGCGG TCTGA
 
Protein sequence
MKKLKLHGFN NLTKSLSFCI YDICYAKTAE ERDGYIAYID ELYNANRLTE ILSETCSIIG 
ANILNIARQD YEPQGASVTI LVSEEPVDPK LIDQTEHPGP LPETVVAHLD KSHICVHTYP
ESHPEGGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTIDYRVRGF TRDVNGMKHF
IDHEINSIQN FMSEDMKSLY DMVDVNVYQE NIFHTKMLLK EFDLKHYMFH TKPEDLTETE
RQQITAALWK EMREIYYGRN ISAV