Gene SeD_A0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0177 
Symbol 
ID6873696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp188800 
End bp190071 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content58% 
IMG OID642783424 
Productputative inner membrane protein 
Protein accessionYP_002214118 
Protein GI198245185 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.182428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGA TGGTTATCGC CGATGATTTT ACCGGATCGA ATGATACCGG CGTCCAGTTG 
GCGAAGAAGG GGGCGAGAAC GGAAGTTATG TTGAGCGCGT CGCAAAAACC GTCCCGCCGC 
GCCGATGTGT TAGTCATTAA CACCGAAAGC CGGGCGATGC CCGCAGATCA GGCGGCATCT 
GCCGTTTATG CCGCGCTTTC CCCGTGGTGT GAGACATCGC CAGCGCCGCT GGTGTACAAA 
AAAATCGACT CCACATTTCG CGGCAATATC GGCGCCGAAG TGACGGCGGC CATGCGCGCC 
AGTCAGCGAA AACTGGCCGT TATCGCCGCC GCGATCCCTG CGGCCGGACG CACGACGCTT 
GAAGGAAAAT GTCTGGTTAA TGGCGTCCCG CTACTGGAAA CCGAATTTGC CAGCGATCCG 
AAAACGCCCA TTGTCTCTTC CCGCATTGCC GAGATAGTGG CGTTGCAAAG TGAGATCCCT 
GTGTATGAAG TCTTTTTGCA GGATGTCCGA CGCGGCGGGT TAAGCGCCTT ACTTACGGCT 
TATGCGGCTG AGGGCGAAGG GATTATCGTC GTGGATGCGG TGGAAGAGCG GGACCTGACG 
TTGATTGCGC AAGCGGCGTG TGAACAACCG TCGATGCCGC TGCTCGTCGG CGCAGCGGGT 
CTGGCGAATG CGTTGCCGGT TGAACTTTTT ATGCAAGACC GGCAGCGGCT GCCGGTGCTG 
GTGGTGGCCG GTTCGATGAG CGAAGCCACG CGACGTCAGG TGGATAATGC GCTGTGCCGG 
GGACGTGCGG AGGTCGTGGA TATCGATGCC GCGCGCATGG TGTCGGATAG CGCGGAACAG 
GAAATCGCGT CTGTCGTAGA GCAGGCCTGC GCGCTGTTAA GTCAGCATCG ACATACGATT 
TTACGCACCA GCCGTCGCGC AGAAGATCGA CAGTTAATCG ACGCGTTGTG CGAAAAATCC 
GCGATGAGCC GTCAGCAATT GGGCGAGCGA CTGAGCCAGC GGCTTGGCGT CGTCACGTTA 
AACATTATCG AGCAGGCGCG GATTGGCGGG CTGTTTCTGA CTGGCGGCGA TATCGCTACC 
GCCGTCGCCG GCGCGCTTGG CGCTGAAGGT TATCGCATTC AGAGCGAGGT GGCGCCCTGT 
ATTCCCTGTG GAACGTTTGT AAACAGCGAA ATTGACGATC TGCCGGTCAT TACCAAAGCG 
GGCGGATTCG GTTCAGACAG TACGTTGTGT GACGCGCTTT ATTATATTGA GGAGATGTAT 
TGTGGAGACT AA
 
Protein sequence
MKMMVIADDF TGSNDTGVQL AKKGARTEVM LSASQKPSRR ADVLVINTES RAMPADQAAS 
AVYAALSPWC ETSPAPLVYK KIDSTFRGNI GAEVTAAMRA SQRKLAVIAA AIPAAGRTTL 
EGKCLVNGVP LLETEFASDP KTPIVSSRIA EIVALQSEIP VYEVFLQDVR RGGLSALLTA 
YAAEGEGIIV VDAVEERDLT LIAQAACEQP SMPLLVGAAG LANALPVELF MQDRQRLPVL 
VVAGSMSEAT RRQVDNALCR GRAEVVDIDA ARMVSDSAEQ EIASVVEQAC ALLSQHRHTI 
LRTSRRAEDR QLIDALCEKS AMSRQQLGER LSQRLGVVTL NIIEQARIGG LFLTGGDIAT 
AVAGALGAEG YRIQSEVAPC IPCGTFVNSE IDDLPVITKA GGFGSDSTLC DALYYIEEMY 
CGD