Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4731 |
Symbol | |
ID | 6795817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 4623765 |
End bp | 4624181 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642778804 |
Product | VagD |
Protein accession | YP_002149366 |
Protein GI | 197251268 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.761951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAA CCTACATGCT GGATACCTGC ATCTGTTCTT TCATTATGCG CGAACAGCCG GAAGCTGTGC TGAAACGCCT TGAGCAGGCA GTGCTGCGCC GCCATCGTAT TGTGGTGTCG GCGATTACCT ACGCCGAAAT GCGTTTTGGC TGTACGGGCA AAAAGGCCTC GCCGCGCCAT GCCCAACTGG TCGATGCATT CTGTAGTCGC CTGGATGCCG TGCTGGCCTG GGACCGGGCG GCAGTGGATG CCACCACAGA GATCCGTGCC GTACTGGCCG CCGCCGGTAC GCCGATTGGA TCAAACGATG CGGCTATCGC CGGCCATGCC ATTGCGTCCG GGGCGATACT GGTCACTAAT AACGTGAGGG AGTTTGAGCG GGTACCGGGT TTGCAGTACG AAGATTGGGT AAAATAA
|
Protein sequence | MSKTYMLDTC ICSFIMREQP EAVLKRLEQA VLRRHRIVVS AITYAEMRFG CTGKKASPRH AQLVDAFCSR LDAVLAWDRA AVDATTEIRA VLAAAGTPIG SNDAAIAGHA IASGAILVTN NVREFERVPG LQYEDWVK
|
| |