| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4291 |
|---|
| Symbol | |
|---|
| ID | 6792473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 4185446 |
|---|
| End bp | 4186282 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642778397 |
|---|
| Product | transcriptional activator RhaS |
|---|
| Protein accession | YP_002148976 |
|---|
| Protein GI | 197250802 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTAC TGCATAGCGT GGATTTTTTT CCATCAGGTA AAGCGCCCGT GGCGATTGAG
CCTCGTCTGC CGCAAGCCGC TTTCCCTGAA CATCATCATG ATTTTCATGA AATCGTGATT
GTGGAACACG GTACGGGCAT TCATGTATTC AACGGGCAGC CGTATACCAT CAGCGGCGGT
ACCGTGTGTT TTGTTCGCGA TCACGACCGG CATTTATATG AACATACCGA CAACCTATGC
CTGACGAATG TACTGTGGCG TTCACCGGAC GCCTTCCAGT TCCTGGCGGG GTTGGATCAA
TTGCTGCCGC AGGAGCAGGA TGGTTACTAT CCTTCTCACT GGCGGGTGAA TCAGAGTGTG
TTGCAGCAGG TGCGCCAGTT GGTCGGTCTG ATGGAGCGCG CCGGAGACGG CGTGGATGCG
CCTGCCGTGG CGAATCGCGA AATTTTGTTT ATGCAACTAC TGGTGTTGTT ACGCCGCAGT
AGTCTGATGG AAGGCGCGAC CAATAACGAC GCCAAACTCA ACCAACTGAT GGCATGGCTG
GAAGACCATT TTGCGGAGGA GGTCTGCTGG GAGGCGGTAG CTGAACAGTT TTCGCTATCG
CTACGCACGC TGCATCGTCA GCTTAAACAG CATACCGGGC TGACGCCGCA ACGTTACCTT
AATCGCCTGC GTTTGATCAA AGCCCGGCAT TTATTACGCC ATAGCGATCA TAGCGTGACA
GAAATCGCGT ACCGCTGCGG TTTTGGCGAC AGTAACCACT TTTCGACTCT GTTTCGCCGA
GAATTTAACT GGTCGCCGCG GGATATCCGT CAGGGACGCG ATGCGATAAT CCAGTAA
|
|---|
| Protein sequence | MTVLHSVDFF PSGKAPVAIE PRLPQAAFPE HHHDFHEIVI VEHGTGIHVF NGQPYTISGG
TVCFVRDHDR HLYEHTDNLC LTNVLWRSPD AFQFLAGLDQ LLPQEQDGYY PSHWRVNQSV
LQQVRQLVGL MERAGDGVDA PAVANREILF MQLLVLLRRS SLMEGATNND AKLNQLMAWL
EDHFAEEVCW EAVAEQFSLS LRTLHRQLKQ HTGLTPQRYL NRLRLIKARH LLRHSDHSVT
EIAYRCGFGD SNHFSTLFRR EFNWSPRDIR QGRDAIIQ
|
|---|
| |