Gene SeAg_B4139 details

Gene Information

• Locus tag: SeAg_B4139
• Symbol: rep
• ID: 6794620
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 4039510
• End bp: 4041534
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642778254
• Product: ATP-dependent DNA helicase Rep
• Protein accession: YP_002148842
• Protein GI: 197251744
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases
• TIGRFAM ID: [TIGR01074] ATP-dependent DNA helicase Rep

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTTAA ATCCCGGCCA ACAACACGCT GTCGAATTCG TCACCGGACC CTGCCTGGTG 
CTGGCAGGAG CGGGTTCTGG TAAAACTCGC GTAATTACCA ATAAAATCGC CCACCTGATC 
CGCGGATGCG GCTATCAGGC CCGGCATATT GCGGCGGTGA CGTTTACCAA CAAGGCAGCG 
CGTGAGATGA AAGAACGCGT CGGGCAGACG CTCGGCCGTA AGGAAGCGCG CGGTTTGATG 
ATCTCCACCT TTCATACGCT AGGGCTGGAT ATTATTAAGC GCGAGTACGC TGCGCTGGGG 
ATGAAATCGA ACTTTTCATT GTTTGACGAT ACCGACCAGG TCGCCTTGCT CAAAGAGCTG 
ACCGAAGGCC TGATCGAAGA CGACAAGGTT CTGTTGCAAC AGCTGATCTC CACGATCTCC 
AACTGGAAAA ACGATCTCAA AACGCCTGCA CAGGCAGCGG CGGGGGCGAA AGGTGAACGC 
GATCGTATTT TTGCCCACTG CTACGGGCTT TACGACGCCC ATATGAAGGC ATGCAACGTT 
CTCGATTTTG ATGATTTGAT TTTGCTGCCG ACGCTGCTGC TGCAACGCAA TGACGAGGTG 
CGCGAGCGCT GGCAGAATAA AATTCGTTAT CTACTGGTGG ATGAATATCA GGATACTAAC 
ACCAGCCAGT ATGAGTTGGT TAAGCTGCTG GTTGGGCAAC GCGCGCGCTT TACGGTCGTA 
GGCGATGACG ATCAGTCTAT CTACTCCTGG CGCGGGGCGC GTCCGCAAAA CCTGGTGTTA 
CTGAGCCAGG ACTTTCCGGC GCTGCAGGTG ATTAAACTGG AGCAAAACTA TCGTTCTTCG 
GGCCGCATCC TGAAAGCGGC GAATATTCTC ATCGCCAATA ATCCGCACGT CTTTGAAAAG 
CGCCTCTTTT CCGAGCTCGG TTACGGCGCG GAACTCAAAG TGTTAAGCGC AAACAATGAA 
GAGCATGAAG CTGAGCGCGT TACCGGCGAA CTGATTGCCC ATCACTTTGT GAACAAGACC 
CAGTACAAGG ATTACGCCAT TCTGTATCGC GGGAATCATC AGTCGCGGGT ATTTGAAAAA 
TTCCTCATGC AGAACCGCAT TCCGTACAAA ATTTCCGGCG GCACCTCATT TTTCTCCCGT 
CCGGAGATTA AAGACTTGCT GGCCTATCTG CGGGTGTTGA CCAACCCGGA TGATGACAGC 
GCTTTCCTGC GCATCGTGAA TACGCCAAAA CGCGAAATCG GTCCGGCCAC TCTGCAAAAG 
CTGGGTGAAT GGGCAATGAC GCGTAATAAA AGCCTGTTTA CCGCCAGCTT TGATATGGGG 
CTTAGCCAGA AGCTGACCGG ACGTGGTTAC GATTCATTGA CGCGTTTTAC CCACTGGCTG 
GGGGAAATCC AGCGTCTGGC CGAACGCGAG CCTGTCGCCG CCGTGCGCGA TCTCATCCAC 
GGTATTGACT ATGAATCCTG GTTGTACGAA ACCTCGCCGA GCCCCAAAGC GGCGGAAATG 
CGTATGAAAA ACGTTAACCA GCTCTTTAGC TGGATGACTG AGATGCTGGA AGGCAACGAA 
CTTGATGAGC CGATGACACT CACCCAGGTG GTTACACGCT TTACGCTGCG CGATATGATG 
GAGCGCGGCG AGAGCGAAGA AGAGCTGGAT CAGGTACAGT TGATGACGCT TCATGCGTCG 
AAAGGACTGG AATTCCCGTA TGTCTATATG GTGGGAATGG AAGAAGGATT TTTGCCGCAT 
CAAAGCAGCA TTGACGAGGA TAATATTGAG GAAGAGCGTC GGCTGGCCTA TGTCGGGATC 
ACTCGCGCGC AGAAAGAGCT CACCTTTACA TTATGTAAAG AGCGCCGTCA GTATGGGGAG 
TTGGTGCGCC CGGAACCCAG TCGCTTCTTG TTAGAACTGC CGCAGGATGA TTTAATCTGG 
GAGCAGGAGC GCAAAGTGGT AAGCGCTGAG GAGCGAATGC AAAAAGGGCA AAGTCATCTG 
GCTAATCTGA AAGCCATGAT GGCGGCAAAG CGAGCGAAAT CGTAG 

 

Protein sequence

MRLNPGQQHA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RGCGYQARHI AAVTFTNKAA 
REMKERVGQT LGRKEARGLM ISTFHTLGLD IIKREYAALG MKSNFSLFDD TDQVALLKEL 
TEGLIEDDKV LLQQLISTIS NWKNDLKTPA QAAAGAKGER DRIFAHCYGL YDAHMKACNV 
LDFDDLILLP TLLLQRNDEV RERWQNKIRY LLVDEYQDTN TSQYELVKLL VGQRARFTVV 
GDDDQSIYSW RGARPQNLVL LSQDFPALQV IKLEQNYRSS GRILKAANIL IANNPHVFEK 
RLFSELGYGA ELKVLSANNE EHEAERVTGE LIAHHFVNKT QYKDYAILYR GNHQSRVFEK 
FLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATLQK 
LGEWAMTRNK SLFTASFDMG LSQKLTGRGY DSLTRFTHWL GEIQRLAERE PVAAVRDLIH 
GIDYESWLYE TSPSPKAAEM RMKNVNQLFS WMTEMLEGNE LDEPMTLTQV VTRFTLRDMM 
ERGESEEELD QVQLMTLHAS KGLEFPYVYM VGMEEGFLPH QSSIDEDNIE EERRLAYVGI 
TRAQKELTFT LCKERRQYGE LVRPEPSRFL LELPQDDLIW EQERKVVSAE ERMQKGQSHL 
ANLKAMMAAK RAKS