Gene SeAg_B3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3938 
Symbol 
ID6793477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp3835315 
End bp3836112 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID642778058 
Productlipopolysaccharide core biosynthesis protein RfaP 
Protein accessionYP_002148653 
Protein GI197251670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAGC TGAAAGCGCC GTTAACCTCA CTATGGCGCG GTAAAGATGC TTTTGAGGAA 
GTAAAAACGT TACAGGGCGA AGTGTTCAGA GAGCTGGAGA CGCGTCGAAC ATTGCGGTTT 
GAGCTGGACG GTAAAAGCTA CTTCCTGAAG TGGCATAAAG GTACTTCGCT GAAAGAAATT 
GTGAAGAACC TGATTTCGTT ACGTATGCCT GTTCTGGGCG CTGACAGAGA ATGGCACGCC 
ATTCATCGTC TACATGAGCT GGGCGTTGAT ACGATGCACG GCGTTGGTTT TGGTGAAAAA 
GGCGTAAACC CGCTAACCAG AACATCATTT ATTATCACCG AAGATTTAAC GCCCACCATT 
AGCCTTGAAG ACTACTGTGC TGACTGGGCT GTTAATCCAC CGGACGCGCA GGTGAAGTGG 
ATGATCATTA AGCGTGTTGC GACTATGGTA CGTAAAATGC ACGCCGGGGG AATTAATCAT 
CGCGACTGTT ATATTTGCCA CTTTCTTCTG CATTTACCTT TCACTGGTCG CGAAGAGGAT 
TTAAAAATCT CCGTAATCGA CCTGCATCGC GCGCAGATAC GTCAGCACGT TCCCCTTCGC 
TGGCGTGACA AAGATTTAAT TGGGCTTTAT TTTTCTTCAA TGAATATTGG CCTGACTCAG 
CGAGATATAT TCCGGTTTAT GCGTGAGTAT TTCTCTCTCC CCCTACGAGA GATTTTGCAA 
AAAGAATCGG GGTTGATTCA TCAGGCGGAT GTTAAAGCCG CTCGAATTAA AGAAAGGACA 
ATAAGAAAAA ATCTGTAA
 
Protein sequence
MVELKAPLTS LWRGKDAFEE VKTLQGEVFR ELETRRTLRF ELDGKSYFLK WHKGTSLKEI 
VKNLISLRMP VLGADREWHA IHRLHELGVD TMHGVGFGEK GVNPLTRTSF IITEDLTPTI 
SLEDYCADWA VNPPDAQVKW MIIKRVATMV RKMHAGGINH RDCYICHFLL HLPFTGREED 
LKISVIDLHR AQIRQHVPLR WRDKDLIGLY FSSMNIGLTQ RDIFRFMREY FSLPLREILQ 
KESGLIHQAD VKAARIKERT IRKNL