| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3837 |
|---|
| Symbol | |
|---|
| ID | 6793997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 3726188 |
|---|
| End bp | 3727486 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642777959 |
|---|
| Product | inner membrane transport protein YhaO |
|---|
| Protein accession | YP_002148555 |
|---|
| Protein GI | 197250307 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00814] serine transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACG ACACATTACC ATTAAATAAC AGTAACGCTA CGACCACACC GCTTTCAACG
AGATTACCGT TTACAAAATA TGATTTTGGC TGGGTGCTCT TGTGTATCGG TATGGCGATC
GGCGCCGGTA CCGTCTTAAT GCCAGTGCAA ATCGGTCTCA AGGGGATCTG GGTATTTATT
ACCGCTTTTA TCATCGCCTA TCCCGCTACC TATATTGTGC AGGATATTTA TCTAAAAACG
TTATCTGAAA GCGAAACCTG TGACGATTAT ACGGATATTA TCAGTCACTA TCTTGGCAAA
AACTGGGGCG TTTTTCTCGG TGTAATCTAT TTTCTTATGA TTATCCACGG GGTGTTTATT
TACTCCCTGT CGGTGGTGTT TGATAGCGCC TCCTATATCA AAACCTTCGG CCTTACTGAG
GCCGATCTTT CGCAGTCTAT TATCTATAAA GTCGCGATTT TCGCCGTGTT GGTGGTGATT
GCCTCCGGCG GGGAAAAGTT ATTATTTAAA ATTTCCGGCC CGATGGTGGT GGTAAAAGTC
GGGATCATTC TGATATTCGG ATTTGCGATG ATCCCACACT GGAATCTTGA TAATATTTCC
GCCTTTCCCG CCGCATCGGT TTTCTTTCGC GACGTACTGC TCACTATCCC ATTTTGCTTC
TTTTCTGCGG TCTTCATTCA GGTGCTAAAC CCAATGAACA TCGCCTATCG TAAGCGCGAA
CCTGACCGTG TGCTGGCCAC CCGGATGGCG ATTCGCACGC ATCGCATTAG CTATATTACG
CTGATTGCCA TTATTCTCTT TTTCTCGTTC TCGTTTACCT TTTCGATTAG CCATGAAGAG
GCGGTATCAG CGTTCGAGCA GAATATTTCC GCCCTTGCGC TGGCAGCTCA GGTAATCCCT
GGCCATATCA TCCATATTAC CTCTACCATC CTCAATATTT TTGCCGTACT TACCGCGTTC
TTTGGTATTT ATTTAGGTTT TCACGAAGCG CTTAAAGGTA TTGTACTGAA TGTATTGAGT
CGTATTATGG ATGTCAAAAA CGTCAACCCA CTGTTACTGA CATCTGGAAT CTGTGTCTTT
ATCGTGGTTA CTCTGGTTAT TTGGGTTTCG TTTCGCGTCT CAGTATTGGT CTTTTTCCAG
TTAGGCAGTC CGCTTTATGG CATTGTCGCG TGTATTATTC CCTTTTTCCT GATTTATAAA
GTAGCGCAAC TGGAAAAATT ACGCGGCCTG AAAACCTGGC TTATTCTGTT ATATGGAATA
TTGTTGTGCC TGTCGCCGTT ATTAAAATTG ATTGAATAA
|
|---|
| Protein sequence | MQDDTLPLNN SNATTTPLST RLPFTKYDFG WVLLCIGMAI GAGTVLMPVQ IGLKGIWVFI
TAFIIAYPAT YIVQDIYLKT LSESETCDDY TDIISHYLGK NWGVFLGVIY FLMIIHGVFI
YSLSVVFDSA SYIKTFGLTE ADLSQSIIYK VAIFAVLVVI ASGGEKLLFK ISGPMVVVKV
GIILIFGFAM IPHWNLDNIS AFPAASVFFR DVLLTIPFCF FSAVFIQVLN PMNIAYRKRE
PDRVLATRMA IRTHRISYIT LIAIILFFSF SFTFSISHEE AVSAFEQNIS ALALAAQVIP
GHIIHITSTI LNIFAVLTAF FGIYLGFHEA LKGIVLNVLS RIMDVKNVNP LLLTSGICVF
IVVTLVIWVS FRVSVLVFFQ LGSPLYGIVA CIIPFFLIYK VAQLEKLRGL KTWLILLYGI
LLCLSPLLKL IE
|
|---|
| |