| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3690 |
|---|
| Symbol | |
|---|
| ID | 6797131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3561849 |
|---|
| End bp | 3562388 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642777816 |
|---|
| Product | PilN family protein |
|---|
| Protein accession | YP_002148412 |
|---|
| Protein GI | 197249631 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3166] Tfp pilus assembly protein PilN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.794853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATT CTGTCAATTT GCTCCCCTGG CGGCGCCAAC ATTACGTAGC GCGTCTGCGG
TTGTGGTGCG TGGTATGGGG CGCGTCCCTG CTGCTGATAG CAAGCCTCAC GACGATCGCC
CGGTTGGTTT TTTGGCAGGA GGGGAGGATT AATGAACTGC TACTGACGGC GGAAAACGGA
CGCACGACGG CGCTTGCGGC GAACATACCG CAGTTGCAGC AGCGTCAGCG GCAGCAACAG
GCGCGATTAC AACGTCAGGC GCAGAGTGAA CTGACGCAAG CCTGGCAATC TATCTTGACT
GACCTTGCCA ACCTGTTGCC AGATCAGGCA TGGCTGACAA GCCTCAATTA TCAGCAAGAG
ACGCTAGAGC TGGAAGGGCT GGCGAGAACG TTTGACGCCC TGCTCACGCT TGAGACATCG
CTTCGTCACT ATGTCAGTTT TCCGCTAAAC CGCACGGGCG CCACACGGCA GGATGCGCAA
GGGCGCTGGC AGTTCCATTA TCAGTTAACG AGGAGCGCCG CCCGTGAACG CGCTCTTTGA
|
|---|
| Protein sequence | MAHSVNLLPW RRQHYVARLR LWCVVWGASL LLIASLTTIA RLVFWQEGRI NELLLTAENG
RTTALAANIP QLQQRQRQQQ ARLQRQAQSE LTQAWQSILT DLANLLPDQA WLTSLNYQQE
TLELEGLART FDALLTLETS LRHYVSFPLN RTGATRQDAQ GRWQFHYQLT RSAARERAL
|
|---|
| |