| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3560 |
|---|
| Symbol | |
|---|
| ID | 6792952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3452237 |
|---|
| End bp | 3456037 |
|---|
| Gene Length | 3801 bp |
|---|
| Protein Length | 1266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642777691 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002148293 |
|---|
| Protein GI | 197251661 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3164] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCGAT TGCCGGGGAT TTTATTGCTC ACTGGAGCCG CGCTCATCGT CATTGCAGCG
CTGCTGGTTA GCGGGCTGCG CCTGGCGTTG CCTCATCTTG ACGCCTGGCG TCCGGCTATC
CTGAATAAAA TTGAGTCTGT GACCGGCGTG CCGGTGGCCG CCAGCCAACT CTCCGCAAGC
TGGCAAAATT TTGGCCCTAC GCTGGAAGCG CATAATATTC ATGCCGCCCT GAAAGATGGC
GGCGAACTGT CGATAAAACG CGTTACGCTG GCGCTGGACG TCTGGCAAAG CCTGTTGCAT
ATGCGCTGGC AGTTTCGCGA CCTGACCTTC TGGCAACTCA ATTTCCGCAC CAACACGCCT
CTTCAAAGCA GCGACGGCGA AGGCATCGAA ACCAGCCGTT TAAGCGATCT TTTCCTGCGG
CAGTTCGATC ATTTCGATCT GCGCGATAGC CAAATCAGTT TTCTGACGCT TTCCGGACAA
CGCGCGGAGC TGGCGATCCC ACAGCTTACC TGGCTAAACG GCAAAGAGCG GCACCGCGCC
GAAGGCGAGG TCAGCCTCTC CAGCCTGACC GGGCAGCACG GCGTGATGCA GGTGCGGATG
GATTTACGCG ATGACGACGG TTTGCTAAAT AACGGCAGAG TCTGGTTACA GGCCGACGAT
ATTGACGTCA AGCCGTGGCT GGGCAAATGG ATGCAGGATA ATGTGGCGCT CCAGACGGCG
CGTTTCAGTC TGGAAGGCTG GATGACGCTC AGTAAAGGCG AAATCGCCGG AGGAGACGTC
TGGCTGAAAC AGGGCGGCGC AAGCTGGCTG GGCGATAACA CGACGCACAC GCTGTCTGTC
GATAACCTGA CGGCGCAGAT TAGCCGCGAG CAGCCGGGCT GGCAGTTTTA TATTCCGGAC
ACACGGATTA CGCTTGATGG TAAACCCTGG CCGAGCGGAG CCTTAACCGT GGCCTGGCTC
CCGCAGCAGG ACGTCGGCGG CGAGAATCAC ACACGTAGCG ATGAGCTACG CATTCGCGCC
AGTAATCTTG AACTGGCGGG GCTGGAAGCA TTACGTCCGC TGGCGGCTAA ACTGTCGCCT
GTGCTGGGCG AAATATGGCA GGCTACGCAG CCGAGCGGAA AGATCGCCAC ACTGGCGCTG
GATATTCCGC TACAGGCCAC CGAAAAAACG CGTTTTCAGG CATCGTGGGA AAATCTTGCC
TGGAAACAGT GGAAGCTGTT GCCCGGCGCG GAACATTTTT CCGGTACGCT GGCAGGAAGC
GTAGAAGACG GGCAGATGAA GGTTGCGATG CAGCAGGCTA AGATGCCCTA TGAAACCGTT
TTTCGCGCGC CGCTGGAAAT TGAAAACGGC GTCGCGACGC TTAGTTGGTT GAAGAATGAG
AACGGCTTTC AGCTTGATGG CCGCGACATT GACGTCAAAG CAAAGGCGGT ACATGCGCGC
GGCGGGTTCC GCTATCTGCA ACCGACGGGC GACGAACCGT GGCTGGGCAT TCTGGCCGGA
ATCAGTACCG ACGATGGATC TCAGGCGTGG CGCTATTTTC CGGAAAACCT GATGGGCAAA
GCGCTGGTCG ATTACCTTAG CGGCGCGATT CAGGGCGGCG AGGCGGATAA CGCCACGTTG
GTTTACGGTG GTAACCCGCA CCTCTTTCCC TATAAGCATA ACGAAGGTCA GTTTGAAGTG
CTGGTGCCGC TACGCAATGC GACGTTTGCT TTTCAACCCG ACTGGCCGGC GCTAAAAAAT
CTCAACATTG AACTGGATTT CCTGAACGAC GGTCTGTGGA TGCGTTCGGA TAGCGTCGAT
TTGGGCGGGG TGAAGGCCAG CAAACTCGCG GCGGCGATTC CGGATTATTC CAAAGAGAAA
CTGCTCATTG ATGCCGATAT TAACGGGCCG GGAAAAGCCG TTGGGCCTTA TTTTGACGAG
ACGCCGCTAA AAGACTCGCT TGGCTCGACG CTGGCGGAGC TCCAATTAGA TGGCGATGTG
AATGCTCGCT TACATCTTGA TATTCCGCTG GACGGAGAAC AGGTTACCGC CGAGGGCGAT
GTCTCGTTGC GTAATAACAG TCTGTTTATT AAGCCGCTAA ACAGCACGCT CAAAAATCTG
AACGGTAAAT TCAGCTTTGT GAATGGCGCG CTAAAAAGCG GGCCGCTGAC GGCAAACTGG
TTTAATCAGC CGCTGAACCT GGATTTCAGT ACGACGGAAG GGGCAAAAGC CTATCAGGTC
GCCGTCAACC TGAACGGTAA CTGGCAGCCA ACGCGTATGG GCGTCTTACC GCCGCAACTG
AATGACGCCC TGAGCGGCAG CGTGACGTGG AATGGTAAAG TCGGCATCGA TCTTCCATAT
CACGCTGACA CCACTTATCA CATCGAGCTG AACGGCGATC TGAGAAATGT GAGCAGTCAC
TTACCTTCTC CGCTAAATAA ACCCGCAGGC GAAGCCATTC CGGTGAACAT TCAGGCTGAC
GGCAACCTGA AAAGTTTTGC GCTAACGGGG AGCGCAGGGA GTAAAAATCA CTTTAACAGC
CGCTGGTTAT TAAATCAGAA GCTGACGTTG GATCGGGCTA TCTGGACGAC GGACAGCCGG
ACGATTCCGC CATTACCTGC TCAACAAGGC GTTGAGCTCA ATCTGCCGGC GCTGGATGGC
GCGCAGTGGC TGGCGTTATT CCAGAAAGGC GCGGCGGATA ACGTGAGCAG TTCGGCCGAG
TTTCCTCAAC GCGTCACGTT GCGTACTCCC GCGCTATCGC TGGGTGGCCA GCAGTGGAAC
AATTTGAGCG TTGTTTCAGC CCCCTCGCTG AACGGAACAA AAATTGAAGC GCAGGGGCGT
GAGGTGAACG CCACGCTGCT CATGCGCAAC CATGCGCCGT GGCTGGCGAA CATTAAGTAC
CTGTATTACA ACCCTGGCGT CGCAAAAACG CACGCCTCGT CACCAACGCC GACATCGCCG
TTGGCTTCGG CGAACACGAT TAGCTTCCGC GGCTGGCCGG ACTTACAGCT TCGCTGCGAA
GAGTGCTGGC TGTGGGGGCA AAAATATGGG CGTATTGATG GCGATTTCGC CATCAAAGGC
AATACGCTGA CTCTGGCGAA TGGCCTGATC GATACCGGAT TCGCCCGTTT GAAAGCGAAC
GGCGAGTGGG TGAATGCGCC GGGTAATGAA CGAACCTCGC TGAAAGGTAG TCTGCATGGT
AGTAACCTCG ACACGGCTGC CGGGTTCTTC GGCATCTCGA CGCCAATCCA GAACGCGTCT
TTTAACGTAG ATTACGATCT GCACTGGCGA AACCCGCCCT GGCAACCTGA GGAAGCCACG
CTCAACGGGA TTTTACGTAC GCGTCTGGGT AAAGGCGAGT TTACTGATCT CAGTAGCGGT
CATGCCGGAC AGTTACTGCG GCTGCTCAGT TTTGATGCGT TGCTGCGTAA GCTGCGGTTT
GACTTCAGAG ATACCTTTAG CGAGGGCTTC TATTTCGACT CTATTCATAG TACCGCGTGG
ATTAAAGATG GCGTCCTGCA TACTGACGAT ACGCTGGTGG ATGGGCTGGA AGCGGATATT
GCAATGAAAG GTTCTGTTGA TCTGGTGCGT CGTCGTCTTG ATATGGAGGC CGTTGTCGCG
CCGGAAATTT CCGCCACCGT GGGCGTCGCC GCCGCGTTTG CCGTTAACCC GATTGTCGGC
GCGGCGGTAT TTGCCGCCAG TAAAGTGTTG GGGCCGCTAT GGAGCAAGGT CTCCATTTTG
CGATATCGCA TTACCGGTCC GGTCGATGCG CCGCAGATCA ACGAAGTTCT GCGCCAACCG
ATAAAAGAAA GCCAGCAATG A
|
|---|
| Protein sequence | MRRLPGILLL TGAALIVIAA LLVSGLRLAL PHLDAWRPAI LNKIESVTGV PVAASQLSAS
WQNFGPTLEA HNIHAALKDG GELSIKRVTL ALDVWQSLLH MRWQFRDLTF WQLNFRTNTP
LQSSDGEGIE TSRLSDLFLR QFDHFDLRDS QISFLTLSGQ RAELAIPQLT WLNGKERHRA
EGEVSLSSLT GQHGVMQVRM DLRDDDGLLN NGRVWLQADD IDVKPWLGKW MQDNVALQTA
RFSLEGWMTL SKGEIAGGDV WLKQGGASWL GDNTTHTLSV DNLTAQISRE QPGWQFYIPD
TRITLDGKPW PSGALTVAWL PQQDVGGENH TRSDELRIRA SNLELAGLEA LRPLAAKLSP
VLGEIWQATQ PSGKIATLAL DIPLQATEKT RFQASWENLA WKQWKLLPGA EHFSGTLAGS
VEDGQMKVAM QQAKMPYETV FRAPLEIENG VATLSWLKNE NGFQLDGRDI DVKAKAVHAR
GGFRYLQPTG DEPWLGILAG ISTDDGSQAW RYFPENLMGK ALVDYLSGAI QGGEADNATL
VYGGNPHLFP YKHNEGQFEV LVPLRNATFA FQPDWPALKN LNIELDFLND GLWMRSDSVD
LGGVKASKLA AAIPDYSKEK LLIDADINGP GKAVGPYFDE TPLKDSLGST LAELQLDGDV
NARLHLDIPL DGEQVTAEGD VSLRNNSLFI KPLNSTLKNL NGKFSFVNGA LKSGPLTANW
FNQPLNLDFS TTEGAKAYQV AVNLNGNWQP TRMGVLPPQL NDALSGSVTW NGKVGIDLPY
HADTTYHIEL NGDLRNVSSH LPSPLNKPAG EAIPVNIQAD GNLKSFALTG SAGSKNHFNS
RWLLNQKLTL DRAIWTTDSR TIPPLPAQQG VELNLPALDG AQWLALFQKG AADNVSSSAE
FPQRVTLRTP ALSLGGQQWN NLSVVSAPSL NGTKIEAQGR EVNATLLMRN HAPWLANIKY
LYYNPGVAKT HASSPTPTSP LASANTISFR GWPDLQLRCE ECWLWGQKYG RIDGDFAIKG
NTLTLANGLI DTGFARLKAN GEWVNAPGNE RTSLKGSLHG SNLDTAAGFF GISTPIQNAS
FNVDYDLHWR NPPWQPEEAT LNGILRTRLG KGEFTDLSSG HAGQLLRLLS FDALLRKLRF
DFRDTFSEGF YFDSIHSTAW IKDGVLHTDD TLVDGLEADI AMKGSVDLVR RRLDMEAVVA
PEISATVGVA AAFAVNPIVG AAVFAASKVL GPLWSKVSIL RYRITGPVDA PQINEVLRQP
IKESQQ
|
|---|
| |