Gene SeAg_B3540 details

Gene Information

• Locus tag: SeAg_B3540
• Symbol: degS
• ID: 6796118
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 3433188
• End bp: 3434258
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642777671
• Product: serine endoprotease
• Protein accession: YP_002148273
• Protein GI: 197249171
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
• TIGRFAM ID: [TIGR02038] periplasmic serine pepetdase DegS

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0189154
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGTGA AGCTCTTACG TTCGGTCGCA ATAGGTTTAA TTGTCGGCGC TATTCTGTTG 
GCCGTCATGC CTTCTTTGCG CAAAATTAAT CCTATCGCCG TCCCGCAATT CGACAGTACC 
GATGAGACGC CAGCCAGTTA TAATTTTGCG GTTCGCCGCG CCGCGCCTGC CGTCGTCAAT 
GTCTATAACC GCAGTATGAA CAGTACCGCG CATAATCAAC TGGAGATCCG CACGCTGGGT 
TCCGGCGTGA TCATGGATCA ACGCGGTTAT ATTATTACCA ACAAGCACGT GATTAACGAT 
GCCGATCAGA TTATCGTCGC GCTACAGGAT GGCCGCGTCT TTGAAGCGCT ACTGGTTGGC 
TCCGATTCGC TTACCGATCT GGCGGTGCTG AAGATCAACG CCACTGGCGG GCTGCCTACC 
ATCCCGATTA ATACAAAGCG TACACCGCAT ATTGGCGACG TCGTACTGGC TATCGGCAAC 
CCATATAATC TGGGACAGAC CATCACCCAG GGGATCATCA GCGCAACGGG TCGTATCGGC 
CTGAACCCGA CGGGGCGACA GAATTTTCTC CAGACCGACG CCTCGATTAA CCACGGTAAT 
TCCGGCGGCG CGCTGGTCAA CTCGTTAGGC GAACTGATGG GGATCAACAC CCTCTCTTTT 
GATAAGAGTA ACGATGGCGA AACGCCGGAA GGTCTTGGTT TTGCGATTCC CTTCCAGCTA 
GCCACGAAAA TTATGGATAA GCTTATCCGC GACGGTCGCG TGATTCGCGG CTATATCGGT 
ATTGGCGGAC GAGAAATCGC GCCGCTGCAC GCGCAGCAGG GTAGCGGCAT GGACCCGATT 
CAGGGCATTG TCGTTAATGA AGTGACGCCA AACGGCCCCG CCGCGCTTGC CGGTATTCAG 
GTTAATGATT TGATTATTTC GGTCAATAAT AAACCCGCTG TGTCCGCGCT GGAGACGATG 
GATCAGGTGG CGGAAATCCG CCCGGGCTCC GTCATTCCGG TCGTGGTAAT GCGGGATGAT 
AAGCAGCTCA CGTTCCAGGT GACGGTGCAG GAATACCCGG CGTCGAACTA A 

 

Protein sequence

MFVKLLRSVA IGLIVGAILL AVMPSLRKIN PIAVPQFDST DETPASYNFA VRRAAPAVVN 
VYNRSMNSTA HNQLEIRTLG SGVIMDQRGY IITNKHVIND ADQIIVALQD GRVFEALLVG 
SDSLTDLAVL KINATGGLPT IPINTKRTPH IGDVVLAIGN PYNLGQTITQ GIISATGRIG 
LNPTGRQNFL QTDASINHGN SGGALVNSLG ELMGINTLSF DKSNDGETPE GLGFAIPFQL 
ATKIMDKLIR DGRVIRGYIG IGGREIAPLH AQQGSGMDPI QGIVVNEVTP NGPAALAGIQ 
VNDLIISVNN KPAVSALETM DQVAEIRPGS VIPVVVMRDD KQLTFQVTVQ EYPASN